DRSC/TRiP Functional Genomics Resources

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Protein Alignment amd and Tdc2

DIOPT Version :9

Sequence 1:NP_476592.1 Gene:amd / 35188 FlyBaseID:FBgn0000075 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_724489.1 Gene:Tdc2 / 246620 FlyBaseID:FBgn0050446 Length:637 Species:Drosophila melanogaster


Alignment Length:501 Identity:227/501 - (45%)
Similarity:319/501 - (63%) Gaps:20/501 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDAKEFREFGKAAIDYIADYLENIRDDDVLPNVEPGYLLDLLPTEMPEEPEAWKDVLGDISRVIK 65
            ||:.|||:.|...::||.:|||.:.:..|.|:||||||..|||.|.|:|||.|..::.|:...|.
  Fly     1 MDSTEFRKRGMEMVEYICNYLETLNERRVTPSVEPGYLRHLLPPEAPQEPEDWDQIMRDVEDKIM 65

  Fly    66 PGLTHWQSPHMHAYYPTSTSYPSIVGEMLASGFGVIGFSWICSPACTELEVVVMDWLAKFLKLPA 130
            ||:||||.|..|||:|...|:|||:|:||..|.|.|||||..||||||||.:|:|||.|.:.||.
  Fly    66 PGVTHWQHPRFHAYFPAGNSFPSILGDMLGDGIGCIGFSWAASPACTELETIVLDWLGKAIGLPD 130

  Fly   131 HFQHASDG-PGGGVIQGSASEAVLVAVLAAREQAVANYRESHPELSESEVRGRLVAYSSDQSNSC 194
            ||....:| .||||||.||||.|||.:||||.||:...:..||.:.|..:..:|:||.|.:::||
  Fly   131 HFLALKEGSTGGGVIQTSASECVLVTMLAARAQALKRLKAQHPFVEEGHLLSKLMAYCSKEAHSC 195

  Fly   195 IEKAGVLAAMPIRLLPAGEDFVLRGDTLRGAIEEDVAAGRIPVICVATLGTTGTCAYDDIESLSA 259
            :|||.::..:.:|:|...:|..|||.|:..|:|||...|.:|.....||||||:||:|::..:..
  Fly   196 VEKAAMICFVKLRILEPDDDASLRGQTIYEAMEEDELQGLVPFFVSTTLGTTGSCAFDNLPEIGK 260

  Fly   260 VCEEFK-VWLHVDAAYAGGAFALEECSDLRKGLDRVDSLNFNLHKFMLVNFDCSAMWLRDANKVV 323
            ..:.|. |||||||||||.:|...|...|.||::..||.|.|.:|::|.|||||.:|:||..::.
  Fly   261 QLQRFPGVWLHVDAAYAGNSFICPELKPLLKGIEYADSFNTNPNKWLLTNFDCSTLWVRDRIRLT 325

  Fly   324 DSFNVDRIYLKHKHEGQSQIP-DFRHWQIPLGRRFRALKVWITFRTLGAEGLRNHVRKHIELAKQ 387
            .:..||.:||||   |.|... |:|||.:||.||||:||:|...|:.|..||::::|.||:|||:
  Fly   326 SALVVDPLYLKH---GYSDAAIDYRHWGVPLSRRFRSLKLWFVLRSYGISGLQHYIRHHIKLAKR 387

  Fly   388 FEQLVLKDSRFELVAPRALGLVCFRPKGDNEITTQLLQRLMDRKKIYMVKAEHAGRQFLRFVVCG 452
            ||:|||||.|||:.....|||||||.||.:::..:||..:.:..|::||.|....|..:||....
  Fly   388 FEELVLKDKRFEICNQVKLGLVCFRLKGSDKLNEKLLSIINESGKLHMVPASVGDRYIIRFCAVA 452

  Fly   453 MDTKASDIDFAW------------QEIESQLTDL--QAEQSLVARK 484
            .:..|.|||:||            :|...:|:::  :.:|..:|:|
  Fly   453 QNATAEDIDYAWDIIVDFANELLEKEQHDELSEIMNRKKQDTLAQK 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amdNP_476592.1 Pyridoxal_deC 35..414 CDD:278699 190/381 (50%)
Tdc2NP_724489.1 Pyridoxal_deC 35..414 CDD:278699 190/381 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 368 1.000 Domainoid score I180
eggNOG 1 0.900 - - E1_COG0076
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.815392 Normalized mean entropy S2516
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223497at33208
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 1 1.000 - - mtm1068
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11999
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.870

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