DRSC/TRiP Functional Genomics Resources

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Protein Alignment amd and Ddc

DIOPT Version :9

Sequence 1:NP_476592.1 Gene:amd / 35188 FlyBaseID:FBgn0000075 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001257781.1 Gene:Ddc / 24311 RGDID:2494 Length:480 Species:Rattus norvegicus


Alignment Length:479 Identity:232/479 - (48%)
Similarity:329/479 - (68%) Gaps:1/479 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDAKEFREFGKAAIDYIADYLENIRDDDVLPNVEPGYLLDLLPTEMPEEPEAWKDVLGDISRVIK 65
            ||::|||..||..:|||||||:.|....|.|:||||||..|:||..|:|||.::|::.||.::|.
  Rat     1 MDSREFRRRGKEMVDYIADYLDGIEGRPVYPDVEPGYLRALIPTTAPQEPETYEDIIRDIEKIIM 65

  Fly    66 PGLTHWQSPHMHAYYPTSTSYPSIVGEMLASGFGVIGFSWICSPACTELEVVVMDWLAKFLKLPA 130
            ||:|||.||:..||:||::|||:::.:||....|.|||||..||||||||.|:||||.|.|:||.
  Rat    66 PGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLELPE 130

  Fly   131 HFQHASDGPGGGVIQGSASEAVLVAVLAAREQAVANYRESHPELSESEVRGRLVAYSSDQSNSCI 195
            .|.....|.||||||||||||.|||:||||.:.:...:.:.|||:::.:..:||||:|||::|.:
  Rat   131 AFLAGRAGEGGGVIQGSASEATLVALLAARTKMIRQLQAASPELTQAALMEKLVAYTSDQAHSSV 195

  Fly   196 EKAGVLAAMPIRLLPAGEDFVLRGDTLRGAIEEDVAAGRIPVICVATLGTTGTCAYDDIESLSAV 260
            |:||::..:.|:.:|:..::.:|...||.|:|.|.|||.||...|.|||||..|::|::..:..:
  Rat   196 ERAGLIGGVKIKAIPSDGNYSMRAAALREALERDKAAGLIPFFVVVTLGTTSCCSFDNLLEVGPI 260

  Fly   261 CEEFKVWLHVDAAYAGGAFALEECSDLRKGLDRVDSLNFNLHKFMLVNFDCSAMWLRDANKVVDS 325
            |.:..||||:||||||.||...|...|..|::..||.|||.||::||||||||||::....:.::
  Rat   261 CNQEGVWLHIDAAYAGSAFICPEFRYLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKKRTDLTEA 325

  Fly   326 FNVDRIYLKHKHEGQSQIPDFRHWQIPLGRRFRALKVWITFRTLGAEGLRNHVRKHIELAKQFEQ 390
            ||:|.:||:|.|:....|.|:||||||||||||:||:|..||..|.:||:.::|||::|:.:||.
  Rat   326 FNMDPVYLRHSHQDSGLITDYRHWQIPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVKLSHEFES 390

  Fly   391 LVLKDSRFELVAPRALGLVCFRPKGDNEITTQLLQRLMDRKKIYMVKAEHAGRQFLRFVVCGMDT 455
            ||.:|.|||:.....|||||||.||.|::...||||:...|||::|......:..|||.||....
  Rat   391 LVRQDPRFEICTEVILGLVCFRLKGSNQLNETLLQRINSAKKIHLVPCRLRDKFVLRFAVCSRTV 455

  Fly   456 KASDIDFAWQEIESQLTD-LQAEQ 478
            :::.:..||:.|....:. |:||:
  Rat   456 ESAHVQLAWEHIRDLASSVLRAEK 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amdNP_476592.1 Pyridoxal_deC 35..414 CDD:278699 191/378 (51%)
DdcNP_001257781.1 Pyridoxal_deC 35..414 CDD:278699 191/378 (51%)
2 X approximate tandem repeats 58..178 66/119 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57772
OrthoDB 1 1.010 - - D223497at33208
OrthoFinder 1 1.000 - - FOG0000865
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11999
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.890

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