DRSC/TRiP Functional Genomics Resources

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Protein Alignment amd and Sepsecs

DIOPT Version :9

Sequence 1:NP_476592.1 Gene:amd / 35188 FlyBaseID:FBgn0000075 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_766078.1 Gene:Sepsecs / 211006 MGIID:1098791 Length:504 Species:Mus musculus


Alignment Length:353 Identity:69/353 - (19%)
Similarity:127/353 - (35%) Gaps:74/353 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 LSESEVRGRLVAYSSDQSNSCIEKAGVLAAMPIRLLPAGEDFVLRGDTLR---GAIEEDV-AAGR 234
            |.....:.:.:.:......||.:........|:.:     :.||.||.||   .|:|..: ..|.
Mouse   155 LRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVI-----ENVLEGDELRTDLKAVEAKIQELGP 214

  Fly   235 IPVICVATLGTTGTC----AYDDIESLSAVCEEFKVWLHVDAAYAGGAFALEECSDL-RKG--LD 292
            ..::|   |.:|..|    ..|.:|.|:.:|..:.:...|:.||   .....:|..| ::|  :.
Mouse   215 EHILC---LHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAY---GLQSSKCMHLIQQGARVG 273

  Fly   293 RVDSLNFNLHKFMLVNFDCSAMWLRDANKVVDSFNVDRIY-LKHKHEGQSQIPDFRHWQIPLGRR 356
            |:|:...:|.|..:|..         ...::..||...|. :...:.|::....           
Mouse   274 RIDAFVQSLDKNFMVPV---------GGAIIAGFNEPFIQDISKMYPGRASASP----------- 318

  Fly   357 FRALKVWITFRTLGAEGLRNHVRKHIE----LAKQFEQLVLKDSRFELVAPR---ALGLVCFRPK 414
              :|.|.||..:||..|.|..:::..|    |:.|.::|....:...|..|.   :|.:......
Mouse   319 --SLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTID 381

  Fly   415 GDNE-ITTQLLQRLMDRK----------KIYMVKAEHAGRQFLRF----------VVCGMDTKAS 458
            |.:: ..|||...|..|:          .:..|.. |..|.|:..          ....:..|..
Mouse   382 GHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSG-HTFRGFMSHADNYPCAYLNAAAAIGMKMQ 445

  Fly   459 DIDFAWQEIESQLTDLQAEQSLVARKSG 486
            |:|...:.::..|..::.||:..:..||
Mouse   446 DVDLFIKRLDKCLNIVRKEQTRASVVSG 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amdNP_476592.1 Pyridoxal_deC 35..414 CDD:278699 51/258 (20%)
SepsecsNP_766078.1 Tetramerization. /evidence=ECO:0000269|PubMed:18093968 1..44
selenium_SpcS 13..458 CDD:211833 64/336 (19%)
Phosphate loop (P-loop). /evidence=ECO:0000269|PubMed:18093968 96..106
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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