DRSC/TRiP Functional Genomics Resources

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Protein Alignment amd and spl-2

DIOPT Version :10

Sequence 1:NP_476592.1 Gene:amd / 35188 FlyBaseID:FBgn0000075 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_505372.1 Gene:spl-2 / 181859 WormBaseID:WBGene00006418 Length:542 Species:Caenorhabditis elegans


Alignment Length:432 Identity:85/432 - (19%)
Similarity:149/432 - (34%) Gaps:139/432 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 EMLASGFGVIGFSWICSPACTELEVVVMDWLAKFLKLPAHFQHASDGPGGGVIQGSASEAVLVAV 156
            ||....||  .|:| .:|...:|...|....|:.:::..:..: .|....|.:....|.::|:|.
 Worm   146 EMYEEVFG--KFAW-TNPLWPKLFPGVRIMEAEVVRMCCNMMN-GDSETCGTMSTGGSISILLAC 206

  Fly   157 LAAREQAVANYRESHPELSESEVRGRLVAYSSDQSNSCIEKAGVLAAMPIRLLPAGE-----DFV 216
            ||.|.:.          |...|....::..||  .::...||.....:.:|.:|...     |.|
 Worm   207 LAHRNRL----------LKRGEKYTEMIVPSS--VHAAFFKAAECFRIKVRKIPVDPVTFKVDLV 259

  Fly   217 LRGDTLRGAIEED--VAAGRIPVICVATLGTTGTCAYDDIESLSAVCEEFKVWLHVDAAYAGGAF 279
                .::.||.:.  :..|..|.....|:        ||||::..:..|:.:.:||||...|...
 Worm   260 ----KMKAAINKRTCMLVGSAPNFPFGTV--------DDIEAIGQLGLEYDIPVHVDACLGGFLL 312

  Fly   280 ALEECSDLRKG--LDRVDSLNFNLHKFMLV-----------------NFDCSAMW---------- 315
            ...|..::|..  :..|.|::.:.||:.|.                 .:.|.|.|          
 Worm   313 PFLEEDEIRYDFRVPGVSSISADSHKYGLAPKGSSVVLYRNKELLHNQYFCDADWQGGIYASATM 377

  Fly   316 ------------------------LRDANKVVDSFNVDRIYLKH----KHEGQSQI--------- 343
                                    ..:|.|:||:....|..|.:    |.:|.|.:         
 Worm   378 EGSRAGHNIALCWAAMLYHAQEGYKANARKIVDTTRKIRNGLSNIKGIKLQGPSDVCIVSWTTND 442

  Fly   344 -------PDF---RHWQIPLGRRFRA-LKVWITFRTLGAEGLRNHVRKHIELAKQFEQLVLKDSR 397
                   .:|   :|||:. |.:|.| :.:.:|.         ||.  |..||:.|    :.|.|
 Worm   443 GVELYRFHNFMKEKHWQLN-GLQFPAGVHIMVTM---------NHT--HPGLAEAF----VADCR 491

  Fly   398 FELVAPRALGLVCFRPKGDNEITTQ-----LLQRLMDRKKIY 434
                  .|:..|......:::.|::     |.|.:.||..::
 Worm   492 ------AAVEFVKSHKPSESDKTSEAAIYGLAQSIPDRSLVH 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amdNP_476592.1 Pyridoxal_deC 35..414 CDD:395219 80/405 (20%)
spl-2NP_505372.1 DOPA_deC_like 130..493 CDD:99743 78/396 (20%)

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