DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment amd and spl-1

DIOPT Version :9

Sequence 1:NP_476592.1 Gene:amd / 35188 FlyBaseID:FBgn0000075 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_499913.1 Gene:spl-1 / 176857 WormBaseID:WBGene00004981 Length:552 Species:Caenorhabditis elegans


Alignment Length:349 Identity:64/349 - (18%)
Similarity:131/349 - (37%) Gaps:91/349 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 PACTELEVVVMDWLAKFLKLPAHFQHASDGPGGGVIQGSASEAVLVAVLAAREQAVANYRESHPE 173
            |...::|       |:.:::..:..:..:...|.|..| .:|::::|..:.|.:|.:...| || 
 Worm   174 PGARKME-------AELIRMVLNLYNGPEDSSGSVTSG-GTESIIMACFSYRNRAHSLGIE-HP- 228

  Fly   174 LSESEVRGRLVAYSSDQSNSCIEKAGVLAAMPIRLLPAGEDFVLRGDTLRGAIEEDVA--AGRIP 236
                      |..:...:::..:||..|..|.:|.:|...|..:....:...|:.:|.  .|..|
 Worm   229 ----------VILACKTAHAAFDKAAHLCGMRLRHVPVDSDNRVDLKEMERLIDSNVCMLVGSAP 283

  Fly   237 VICVATLGTTGTCAYDDIESLSAVCEEFKVWLHVDAAYAGGAFALEECSDLRKGLDRVDSLNFNL 301
            .....|:        |.|..::.:.:::.:.:||||..  |.|.:...:|.              
 Worm   284 NFPSGTI--------DPIPEIAKLGKKYGIPVHVDACL--GGFMIPFMNDA-------------- 324

  Fly   302 HKFMLVNFDCSAMWLRDANKVVDSFNVDRIYLKHKH----EGQS-------QIPDFRHWQIP--- 352
             .:::..||.       .|..|.|.:.|    .||:    :|.|       ::..|:::.:.   
 Worm   325 -GYLIPVFDF-------RNPGVTSISCD----THKYGCTPKGSSIVMYRSKELHHFQYFSVADWC 377

  Fly   353 ---------LGRRFRA--LKVWITFRTLGAEGLRNHVRKHIELAKQFEQLVLKDSRFELVAPRA- 405
                     .|.|..|  ...|.|..:.|.:   .:||:..::.|....|..|..:.:.:.|.. 
 Worm   378 GGIYATPTIAGSRAGANTAVAWATLLSFGRD---EYVRRCAQIVKHTRMLAEKIEKIKWIKPYGK 439

  Fly   406 --LGLVCFRPKGDN--EITTQLLQ 425
              :.||.|...|.|  |::.::::
 Worm   440 SDVSLVAFSGNGVNIYEVSDKMMK 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amdNP_476592.1 Pyridoxal_deC 35..414 CDD:278699 61/334 (18%)
spl-1NP_499913.1 DOPA_deC_like 138..501 CDD:99743 64/349 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.