DRSC/TRiP Functional Genomics Resources

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Protein Alignment amd and spl-1

DIOPT Version :10

Sequence 1:NP_476592.1 Gene:amd / 35188 FlyBaseID:FBgn0000075 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_499913.1 Gene:spl-1 / 176857 WormBaseID:WBGene00004981 Length:552 Species:Caenorhabditis elegans


Alignment Length:349 Identity:64/349 - (18%)
Similarity:131/349 - (37%) Gaps:91/349 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 PACTELEVVVMDWLAKFLKLPAHFQHASDGPGGGVIQGSASEAVLVAVLAAREQAVANYRESHPE 173
            |...::|       |:.:::..:..:..:...|.|..| .:|::::|..:.|.:|.:...| || 
 Worm   174 PGARKME-------AELIRMVLNLYNGPEDSSGSVTSG-GTESIIMACFSYRNRAHSLGIE-HP- 228

  Fly   174 LSESEVRGRLVAYSSDQSNSCIEKAGVLAAMPIRLLPAGEDFVLRGDTLRGAIEEDVA--AGRIP 236
                      |..:...:::..:||..|..|.:|.:|...|..:....:...|:.:|.  .|..|
 Worm   229 ----------VILACKTAHAAFDKAAHLCGMRLRHVPVDSDNRVDLKEMERLIDSNVCMLVGSAP 283

  Fly   237 VICVATLGTTGTCAYDDIESLSAVCEEFKVWLHVDAAYAGGAFALEECSDLRKGLDRVDSLNFNL 301
            .....|:        |.|..::.:.:::.:.:||||..  |.|.:...:|.              
 Worm   284 NFPSGTI--------DPIPEIAKLGKKYGIPVHVDACL--GGFMIPFMNDA-------------- 324

  Fly   302 HKFMLVNFDCSAMWLRDANKVVDSFNVDRIYLKHKH----EGQS-------QIPDFRHWQIP--- 352
             .:::..||.       .|..|.|.:.|    .||:    :|.|       ::..|:::.:.   
 Worm   325 -GYLIPVFDF-------RNPGVTSISCD----THKYGCTPKGSSIVMYRSKELHHFQYFSVADWC 377

  Fly   353 ---------LGRRFRA--LKVWITFRTLGAEGLRNHVRKHIELAKQFEQLVLKDSRFELVAPRA- 405
                     .|.|..|  ...|.|..:.|.:   .:||:..::.|....|..|..:.:.:.|.. 
 Worm   378 GGIYATPTIAGSRAGANTAVAWATLLSFGRD---EYVRRCAQIVKHTRMLAEKIEKIKWIKPYGK 439

  Fly   406 --LGLVCFRPKGDN--EITTQLLQ 425
              :.||.|...|.|  |::.::::
 Worm   440 SDVSLVAFSGNGVNIYEVSDKMMK 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amdNP_476592.1 Pyridoxal_deC 35..414 CDD:395219 61/334 (18%)
spl-1NP_499913.1 DOPA_deC_like 138..501 CDD:99743 64/349 (18%)

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