DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment amd and black

DIOPT Version :10

Sequence 1:NP_476592.1 Gene:amd / 35188 FlyBaseID:FBgn0000075 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_319650.5 Gene:black / 1279870 VectorBaseID:AGAMI1_011119 Length:566 Species:Anopheles gambiae


Alignment Length:492 Identity:122/492 - (24%)
Similarity:204/492 - (41%) Gaps:76/492 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RDDDVLPNVEPGYLLDLLPTEMPEEPEAWKDVL----GDISRVIKPGLTHWQSPHMHAYYP---- 81
            |.:.||..|:|..|...|...:.:||:..:.:|    ..|...:|.|         |.|:.    
Mosquito   109 RANKVLNWVDPEELQRTLDLALKDEPDTHEKLLELTRATIRHSVKTG---------HPYFMNQLF 164

  Fly    82 TSTSYPSIVGEMLASGFGVIGFSWICSPACTELEVVVMDWLAKFLKLPAHFQHASDGPGGGVIQG 146
            :|.......|::|........:::..||....:|.||:..:...:..|       ||.|.|:...
Mosquito   165 SSVDPYGFAGQVLTDALNPSVYTYEVSPVFVLMEEVVLREMRTIVGYP-------DGEGDGIFAP 222

  Fly   147 SASEAVLVAVLAAREQAVANYRESHPELSESEVRG-----RLVAYSSDQSNSCIEKAGVLAAMPI 206
            ..|.|...|:..||          |..:.:.:.:|     |||.::|:.::..::|   ||:   
Mosquito   223 GGSMANGYAISCAR----------HKFMPDIKTKGLHALPRLVIFTSEDAHYSVKK---LAS--- 271

  Fly   207 RLLPAGEDFV----------LRGDTLRGAIEEDVAAGRIPVICVATLGTTGTCAYDDIESLSAVC 261
             .:..|.|.|          :|.:.|...|....:.|.:|.:..||.|||...|:|.:|.::.:|
Mosquito   272 -FMGIGSDNVYAIKTDNVGKIRVEHLESEILRAKSEGALPFMVSATAGTTVIGAFDPLEQIADLC 335

  Fly   262 EEFKVWLHVDAAYAGGAFALEECSDLRKGLDRVDSLNFNLHKFMLVNFDCSAMWLRDANKVVDSF 326
            .::.:|:|||||:.|||...::...|.||::|.||:.:|.||.:.....||.:..|..|.:.::.
Mosquito   336 AKYNLWMHVDAAWGGGALMSKKYRTLLKGIERSDSVTWNPHKLLAAPQQCSTLLTRHRNILAEAH 400

  Fly   327 NVDRIYLKHKHEGQSQIPDFRHWQIPLGRRFRALKVWITFRTLGAEGLRNHVRKHIELAKQFEQL 391
            :.:..||..|.:......|.....|..|||...||.|..:|..|..|...|:.|..|.|:.|...
Mosquito   401 STNATYLFQKDKFYDTRYDTGDKHIQCGRRADVLKFWFMWRAKGTAGFEAHIDKVFENAEHFTSS 465

  Fly   392 VLKDSRFELV--APRALGLVCF-----------RPKGD-----NEITTQLLQRLM-DRKKIYMVK 437
            :.....||:|  .|.... |||           |...:     :::..::.:|:| |...:...:
Mosquito   466 IKARPGFEMVIEQPECTN-VCFWYVPPGLRGVPRDSAEYRDRLHKVAPKVKERMMKDGSMMITYQ 529

  Fly   438 AEHAGRQFLRFVVCGMDTKASDIDFAWQEIESQLTDL 474
            ..|....|.|.|:.......||:::...|||....||
Mosquito   530 PIHDKPNFFRLVLQNSSLDKSDMNYIIDEIERLGKDL 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amdNP_476592.1 Pyridoxal_deC 35..414 CDD:395219 104/414 (25%)
blackXP_319650.5 None

Return to query results.
Submit another query.