DRSC/TRiP Functional Genomics Resources

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Protein Alignment amd and hdc

DIOPT Version :10

Sequence 1:NP_476592.1 Gene:amd / 35188 FlyBaseID:FBgn0000075 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_017947930.2 Gene:hdc / 100497702 XenbaseID:XB-GENE-979207 Length:672 Species:Xenopus tropicalis


Alignment Length:475 Identity:224/475 - (47%)
Similarity:307/475 - (64%) Gaps:3/475 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDAKEFREFGKAAIDYIADYLENIRDDDVLPNVEPGYLLDLLPTEMPEEPEAWKDVLGDISRVIK 65
            |:.:|:|:.||..:|||..||..:|:..|.|:|:|||:..|||...|.|.|:|:.:..||..:|.
 Frog    28 MEPEEYRKRGKELVDYICQYLSTVRERRVNPDVQPGYMRALLPDSAPVESESWERIFRDIEDIIM 92

  Fly    66 PGLTHWQSPHMHAYYPTSTSYPSIVGEMLASGFGVIGFSWICSPACTELEVVVMDWLAKFLKLPA 130
            ||:.||||||||||:|..||:||::|:|||.....:||:|..||||||||:.|||||||.|.||.
 Frog    93 PGVVHWQSPHMHAYFPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPC 157

  Fly   131 HF-QHASDGPGGGVIQGSASEAVLVAVLAAREQAVANYRESHPELSESEVRGRLVAYSSDQSNSC 194
            || .|.....||||:|.:.||:.|:|:||||:..:...:.|.|:..:|::..||:||:|:|::|.
 Frog   158 HFLHHYPSSKGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDSDDSQLNSRLIAYASNQAHSS 222

  Fly   195 IEKAGVLAAMPIRLLPAGEDFVLRGDTLRGAIEEDVAAGRIPVICVATLGTTGTCAYDDIESLSA 259
            :||||:::.:.:|.||..|:|.||||||:.|:|||...|.:||...|||||||.||:|.:..|..
 Frog   223 VEKAGLISLVKVRFLPVDENFCLRGDTLKAAVEEDRKNGLVPVFVCATLGTTGVCAFDYLAELGP 287

  Fly   260 VCEEFKVWLHVDAAYAGGAFALEECSDLRKGLDRVDSLNFNLHKFMLVNFDCSAMWLRDANKVVD 324
            ||...|:|||:||||||.||...|...|..|:|..||..||..|:|:|:|||:|.|::|..|:..
 Frog   288 VCAREKLWLHIDAAYAGTAFLCPEFRTLMNGVDYADSFTFNPSKWMMVHFDCTAFWVKDKYKLQQ 352

  Fly   325 SFNVDRIYLKHKHEGQSQIPDFRHWQIPLGRRFRALKVWITFRTLGAEGLRNHVRKHIELAKQFE 389
            :|:|:.|||:|.:.|.:  .||.||||||.||||:||:|...|:.|.:.|:.|:|...||||.||
 Frog   353 TFSVNPIYLRHANTGAA--TDFMHWQIPLSRRFRSLKLWFVIRSFGVKNLQAHIRHGAELAKYFE 415

  Fly   390 QLVLKDSRFELVAPRALGLVCFRPKGDNEITTQLLQRLMDRKKIYMVKAEHAGRQFLRFVVCGMD 454
            .||..|..||:.|.|.||||.||.||.|.:|.::|..|....|:|:|.|.......:||.|....
 Frog   416 SLVTSDQMFEVPAKRHLGLVVFRLKGPNVLTEEVLAELTKSGKMYLVPATINDELIIRFTVTSQF 480

  Fly   455 TKASDIDFAWQEIESQLTDL 474
            |...||...|..|.....::
 Frog   481 TTRDDILRDWNLIRQSAINI 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amdNP_476592.1 Pyridoxal_deC 35..414 CDD:395219 192/379 (51%)
hdcXP_017947930.2 Pyridoxal_deC 62..440 CDD:395219 192/379 (51%)

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