DRSC/TRiP Functional Genomics Resources

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Protein Alignment amd and gad2

DIOPT Version :10

Sequence 1:NP_476592.1 Gene:amd / 35188 FlyBaseID:FBgn0000075 Length:510 Species:Drosophila melanogaster
Sequence 2:XP_017950266.1 Gene:gad2 / 100493806 XenbaseID:XB-GENE-976598 Length:588 Species:Xenopus tropicalis


Alignment Length:515 Identity:129/515 - (25%)
Similarity:214/515 - (41%) Gaps:88/515 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FGKAAIDYIADYLENI--RDDDVLPNVEPGYLLDLLPTEMPEEPEAWKDVLGDISRVIKPGLTHW 71
            |.:..||.:..|:...  |...|:....|..||.....|:.|:|::...:|.:....:|      
 Frog   113 FLQDVIDVLLQYVVQTFDRSTKVIDFHYPNELLQAYNWELSEQPQSLDGILLNCKTTLK------ 171

  Fly    72 QSPHMHAYYPTSTSYPSIVGEMLASGFGVIGFS--WICSPACTE------------LEVVVMDWL 122
                    |...|.:|....: |::|..::|.:  |:.|.|.|.            ||.|.:..:
 Frog   172 --------YAIKTGHPRYFNQ-LSTGLDMVGLAADWLTSTANTNMFTYEIAPVFVLLEYVTLKKM 227

  Fly   123 AKFLKLPAHFQHASDGPGGGVIQGSASEAVLVAVLAAREQAVANYRESHPELSESEVRG--RLVA 185
            .:.:..|.       |.|.|:.....:.:.|.|:|.||       .:..||:.|..:..  ||||
 Frog   228 REMIGWPG-------GSGDGIFSPGGAISNLYAMLIAR-------FKMFPEVKEKGMAALPRLVA 278

  Fly   186 YSSDQSNSCIEKAGVLAAMPIRLLPAGEDFVL------RGDTLRGAIEEDVAA----GRIPVICV 240
            ::|:.|:..::|..  ||:.|     |.|.|:      ||..:...:|..:..    |.:|....
 Frog   279 FTSEHSHFSVKKGA--AALGI-----GTDSVILIKADERGRLIPSDLERRIIEAKQNGYVPFFVS 336

  Fly   241 ATLGTTGTCAYDDIESLSAVCEEFKVWLHVDAAYAGGAFALEECSDLRKGLDRVDSLNFNLHKFM 305
            ||.|||...|:|.:.|::.:|:::::|:|||||:.||.....:......|.||.:|:.:|.||.|
 Frog   337 ATAGTTVYGAFDPLVSIADICKKYRIWMHVDAAWGGGLLMSRKHKWKLNGADRANSVTWNPHKMM 401

  Fly   306 LVNFDCSAMWLRDANKVVDSFNVDRIYL--KHKHEGQSQIPDFRHWQIPLGRRFRALKVWITFRT 368
            .|...|||:.:|:...:.:...:...||  :.||...|.  |.....:..||.....|:|:.:|.
 Frog   402 GVPLQCSALLVREEGLMQNCNQMHASYLFQQDKHYDLSY--DTGDKALQCGRHVDIFKLWLMWRA 464

  Fly   369 LGAEGLRNHVRKHIELAKQFEQLVLKDSRFELV---APRALGLVCF-------RPKGDNE----- 418
            .|..|...|:.|.:||::.....:.....:|:|   .|:... |||       |...|||     
 Frog   465 KGTTGFEAHIDKCLELSEYLYNKIKNREGYEMVIEGKPQHTN-VCFWYVPPSLRNMEDNEERMNR 528

  Fly   419 ---ITTQLLQRLMDRKKIYMVKAEHAGR-QFLRFVVCGMDTKASDIDFAWQEIESQLTDL 474
               :...:..|:|:.....:....|..: .|.|.|:........||||..:|||....||
 Frog   529 LSKVAPIIKARMMEYGTTMVSYQPHGDKGNFFRMVISNPAAAHQDIDFLIEEIERLGQDL 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amdNP_476592.1 Pyridoxal_deC 35..414 CDD:395219 105/416 (25%)
gad2XP_017950266.1 Pyridoxal_deC 141..512 CDD:395219 104/409 (25%)

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