DRSC/TRiP Functional Genomics Resources

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Protein Alignment amd and gad3

DIOPT Version :10

Sequence 1:NP_476592.1 Gene:amd / 35188 FlyBaseID:FBgn0000075 Length:510 Species:Drosophila melanogaster
Sequence 2:NP_001083039.2 Gene:gad3 / 100038790 ZFINID:ZDB-GENE-070424-80 Length:546 Species:Danio rerio


Alignment Length:527 Identity:130/527 - (24%)
Similarity:210/527 - (39%) Gaps:113/527 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EFGKAAIDYIADYLENI----------RDDDVLPNVEPGYL---LDLLPTEMPEEPEAWKDVLGD 59
            |.|:.|..:....|.||          |...||....|..|   |:....|:|::|:..:.:|.|
Zfish    59 EDGEEATKHFLQELVNILLAYISKSLKRSTKVLDFHYPHQLNEGLEGFSLELPDQPDNLEQLLVD 123

  Fly    60 ISRVIKPGLTHWQSPHMHAYYPTSTSYP--SIVGEMLASGFGVIGFSWICSPACTELEVVVMDWL 122
            ....:|.|:   ::.|...:...||...  .:.||.|.|......|::..||....:|.||:..:
Zfish   124 CRDTLKYGV---KTGHPRFFNQLSTGLDIVGLAGEWLTSTANTNMFTYEISPVFILMEEVVLRKM 185

  Fly   123 AKFLKLPAHFQHASDG---PGGGVIQGSASEAVLVAVLAAREQ---AVANYRESH-----PELSE 176
            ...:..|   :...||   |||       |.:.|.:||.||..   ||    ::|     |    
Zfish   186 HTIIGWP---EEDGDGIFCPGG-------SMSNLYSVLLARFHLFPAV----KTHGMCAIP---- 232

  Fly   177 SEVRGRLVAYSSDQSNSCIEKAGVLAAMPIRLLPAGEDFVL------RG----DTLRGAIEEDVA 231
                 ||..::|..|:..|:|:..       :|..|.:.|:      ||    ..|..:|||..:
Zfish   233 -----RLAMFTSAHSHYSIKKSAA-------VLGIGTENVIVVRCDERGKMISSELNSSIEEAKS 285

  Fly   232 AGRIPVICVATLGTTGTCAYDDIESLSAVCEEFKVWLHVDAAYAGGAFALEECSDLRKGLDRVDS 296
            .|.:|....||.|||...|:|.:..::.:||...:|:|||||:.||.....:......|::|..|
Zfish   286 KGLVPFYVNATAGTTVYGAFDPLHKIADICEHHGLWMHVDAAWGGGLLLSNKHRVKLHGIERAHS 350

  Fly   297 LNFNLHKFMLVNFDCSAM------WLRDANKVVDSFNVDRIYLKHKHEGQSQIPDFRHWQIPLGR 355
            :.:|.||.|.|...||.:      .|:..|::...:    ::...||...|.  |.....|..||
Zfish   351 VTWNPHKMMGVPLQCSTILVKRKGLLQQCNQLCAEY----LFQPDKHYEVSY--DTGDKSIQCGR 409

  Fly   356 RFRALKVWITFRTLGAEGLRNHVRKHIELAKQFEQLVLKDSRFELVAPRALGLVCFRPKGDNEIT 420
            .....|:|:.::..|:||..:.|...:|.|:.....:.:.:.|:||...       :|:..|...
Zfish   410 HVDIFKLWLMWKAKGSEGFESQVNHCLENAEYLYYKLKRRTDFQLVFKG-------KPEHSNVCF 467

  Fly   421 TQLLQRLMD-------RKKIYMVKAE-----------HAGRQ-------FLRFVVCGMDTKASDI 460
            ..|.:|:.:       .|:::||..:           ..|.|       |.|.|.....|:..|:
Zfish   468 WYLPKRVQNIPLGPEREKELHMVAPKIKTKMMEEGFTMIGYQPLEDKVNFFRCVFSNPATQREDV 532

  Fly   461 DFAWQEI 467
            ||...||
Zfish   533 DFLLDEI 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amdNP_476592.1 Pyridoxal_deC 35..414 CDD:395219 103/410 (25%)
gad3NP_001083039.2 Pyridoxal_deC 96..469 CDD:395219 105/418 (25%)

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