Protein Alignment Lim3 and LMO4

DIOPT Version :10

• Sequence 1: NP_001260559.1
• Gene: Lim3 / 35184
• FlyBaseID: FBgn0002023
• Length: 555
• Species: Drosophila melanogaster
• Sequence 2: NP_006760.1
• Gene: LMO4 / 8543
• HGNCID: 6644
• Length: 165
• Species: Homo sapiens
• Alignment Length: 141
• Identity: 54/141 - (38%)
• Similarity: 81/141 - (57%)
• Gaps: 11/141 - (7%)

  Fly   121 KCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLND---KCFARNGQLFCKEDFFKRYGTK-- 180
            :|.||...|.|||:|..::..||::||:||.|..||.|   .|:.::|.:.|:.|:.:.:|..
Human    22 RCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRLFGNSGA 86

  Fly   181 CSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDYEEAKAKGLY 245
            ||||...||.:::|.|||.|||||:||.|:.|...|..||.|:.: :..|.|:.|...|     .
Human    87 CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYI-NGSLFCEHDRPTA-----L 145

  Fly   246 LDGSLDGDQPN 256
            ::|.|:..|.|
Human   146 INGHLNSLQSN 156

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lim3	NP_001260559.1	LIM1_Lhx3_Lhx4	122..173	CDD:188754	21/53 (40%)
		LIM2_Lhx3_Lhx4	181..236	CDD:188762	25/54 (46%)
		Homeodomain	257..313	CDD:459649	54/141 (38%)
LMO4	NP_006760.1	LIM1_LMO4	23..77	CDD:188772	21/53 (40%)
		LIM2_LMO4	87..141	CDD:188773	25/54 (46%)