| Sequence 1: | NP_001260559.1 | Gene: | Lim3 / 35184 | FlyBaseID: | FBgn0002023 | Length: | 555 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001116445.1 | Gene: | lhx4 / 571943 | ZFINID: | ZDB-GENE-060728-1 | Length: | 391 | Species: | Danio rerio |
| Alignment Length: | 379 | Identity: | 198/379 - (52%) |
|---|---|---|---|
| Similarity: | 237/379 - (62%) | Gaps: | 49/379 - (12%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 119 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKRYGTKCSA 183
Fly 184 CDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDYEEAKAKGLYLDG 248
Fly 249 SLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKR 313
Fly 314 LKKDAGRTRWSQYFRSMKGN-CSPRTDKFLDKDELKVDYDSFSHH-------------------D 358
Fly 359 LSNDSYSTVNLGLDEGASP-HSIRGSYMHGSSSPSQYPPSSRSPPPVGQGHT-----FGSYPDNI 417
Fly 418 VYTNIDQAVGSSLHASKAHHRLHSSNNVSDLSNDSSPDQGYPDFPPSPDSWLGD 471 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Lim3 | NP_001260559.1 | LIM1_Lhx3_Lhx4 | 122..173 | CDD:188754 | 31/50 (62%) |
| LIM2_Lhx3_Lhx4 | 181..236 | CDD:188762 | 39/54 (72%) | ||
| Homeobox | 259..312 | CDD:278475 | 48/52 (92%) | ||
| lhx4 | NP_001116445.1 | LIM1_Lhx4 | 33..84 | CDD:188852 | 31/50 (62%) |
| LIM2_Lhx3_Lhx4 | 92..147 | CDD:188762 | 39/54 (72%) | ||
| Homeobox | 163..216 | CDD:278475 | 48/52 (92%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 99 | 1.000 | Domainoid score | I7013 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG4577 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 359 | 1.000 | Inparanoid score | I2174 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1174754at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002911 | |
| OrthoInspector | 1 | 1.000 | - | - | otm24339 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_106440 | |
| Panther | 1 | 1.100 | - | - | O | PTHR24208 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2568 |
| SonicParanoid | 1 | 1.000 | - | - | X1144 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 14 | 13.860 | |||||