Sequence 1: | NP_001260559.1 | Gene: | Lim3 / 35184 | FlyBaseID: | FBgn0002023 | Length: | 555 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524623.2 | Gene: | zfh2 / 43795 | FlyBaseID: | FBgn0004607 | Length: | 3005 | Species: | Drosophila melanogaster |
Alignment Length: | 595 | Identity: | 112/595 - (18%) |
---|---|---|---|
Similarity: | 190/595 - (31%) | Gaps: | 204/595 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 HHHQHQHQLQHPPQQ---QPHPHQQLQHPLQ----------------QQQHLSAMDNH----QQH 54
Fly 55 QPHIHQQQQQQQ--------------------------QLPPTPQASHLVGG--------QQQQQ 85
Fly 86 QHPHHNHLAVDQ---------------DDPNPELVLALISRNRALEATIPKCGGCHELILDRFIL 135
Fly 136 KVLERTWHAKCLQCSECHG-----QLNDKCFARNGQLFCKEDFFKRYGTKCSACDMGIPPTQVVR 195
Fly 196 RAQDNVYHLQCFLCAMC----SRTLNTGDEFYLMEDRKLICKRDYEEAKAKGLYLDGSLD----G 252
Fly 253 DQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVVQVWFQNRRAKEKRLKKD 317
Fly 318 AGRTRWSQYFRSMKGNCSPRTDKFLDKDELKVDYDSFSHHDLSNDSYS---TVNLGLDEGASPHS 379
Fly 380 IRGSYMHGSSSPSQYPPSSRSPPPVGQGHTFGSYPDNIVYTNIDQAVGSSLHASKAHHRLHSSNN 444
Fly 445 VSDLSNDSSPDQGYPD----FPPSPDSWLGDSGSTNTTS-------------------ANNNANN 486
Fly 487 NSSSSHNNNN 496 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lim3 | NP_001260559.1 | LIM1_Lhx3_Lhx4 | 122..173 | CDD:188754 | 4/55 (7%) |
LIM2_Lhx3_Lhx4 | 181..236 | CDD:188762 | 12/58 (21%) | ||
Homeobox | 259..312 | CDD:278475 | 25/52 (48%) | ||
zfh2 | NP_524623.2 | C2H2 Zn finger | 561..581 | CDD:275368 | |
C2H2 Zn finger | 616..633 | CDD:275368 | |||
C2H2 Zn finger | 1515..1542 | CDD:275371 | |||
C2H2 Zn finger | 1543..1564 | CDD:275371 | |||
HOX | 1797..1853 | CDD:197696 | |||
Homeobox | 2158..2210 | CDD:278475 | |||
Homeobox | 2764..2816 | CDD:278475 | 25/51 (49%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45444981 | |
Domainoid | 1 | 1.000 | 48 | 1.000 | Domainoid score | I4481 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |