Sequence 1: | NP_001260559.1 | Gene: | Lim3 / 35184 | FlyBaseID: | FBgn0002023 | Length: | 555 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032526.2 | Gene: | Lhx6 / 16874 | MGIID: | 1306803 | Length: | 392 | Species: | Mus musculus |
Alignment Length: | 208 | Identity: | 83/208 - (39%) |
---|---|---|---|
Similarity: | 122/208 - (58%) | Gaps: | 17/208 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 122 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQL--NDKCFARNGQLFCKEDFFKRYGTKCSAC 184
Fly 185 DMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLMEDRKLICKRDYE---------EAK 240
Fly 241 AKGLYLDGSLDGDQ-----PNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQDTGLDMRVV 300
Fly 301 QVWFQNRRAKEKR 313 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lim3 | NP_001260559.1 | LIM1_Lhx3_Lhx4 | 122..173 | CDD:188754 | 21/52 (40%) |
LIM2_Lhx3_Lhx4 | 181..236 | CDD:188762 | 25/54 (46%) | ||
Homeobox | 259..312 | CDD:278475 | 21/52 (40%) | ||
Lhx6 | NP_032526.2 | LIM1_Lhx6 | 99..152 | CDD:188766 | 21/52 (40%) |
LIM2_Lhx6 | 160..214 | CDD:188768 | 25/54 (46%) | ||
Homeobox | 252..304 | CDD:278475 | 21/51 (41%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |