Sequence 1: | NP_001260559.1 | Gene: | Lim3 / 35184 | FlyBaseID: | FBgn0002023 | Length: | 555 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001034742.1 | Gene: | Lhx3 / 16871 | MGIID: | 102673 | Length: | 402 | Species: | Mus musculus |
Alignment Length: | 408 | Identity: | 209/408 - (51%) |
---|---|---|---|
Similarity: | 252/408 - (61%) | Gaps: | 54/408 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 99 DPNPE-----LVLALISRNRALEATIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLND 158
Fly 159 KCFARNGQLFCKEDFFKRYGTKCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFY 223
Fly 224 LMEDRKLICKRDYEEAKAKGLYLDGSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQ 288
Fly 289 LSQDTGLDMRVVQVWFQNRRAKEKRLKKDAGRTRWSQYFRSMKGNCSPRTDKFLDKDELKVDYDS 353
Fly 354 FSHHDLSNDSYSTVNLGLDEG------------ASPHSIRGSYM--HGS-SSPSQY--------- 394
Fly 395 --PPSSRSPPPV-GQGHTFGS--YPDNIVYTNIDQAVGSSLHASKAHHRLHSSNN-VSDLSNDSS 453
Fly 454 PDQGYPDFPPSPDSWLGD 471 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lim3 | NP_001260559.1 | LIM1_Lhx3_Lhx4 | 122..173 | CDD:188754 | 28/50 (56%) |
LIM2_Lhx3_Lhx4 | 181..236 | CDD:188762 | 39/54 (72%) | ||
Homeobox | 259..312 | CDD:278475 | 48/52 (92%) | ||
Lhx3 | NP_001034742.1 | LIM1_Lhx3b | 33..87 | CDD:188851 | 30/53 (57%) |
LIM2_Lhx3_Lhx4 | 95..150 | CDD:188762 | 39/54 (72%) | ||
Homeobox | 165..218 | CDD:278475 | 48/52 (92%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 111 | 1.000 | Domainoid score | I6284 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4577 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H7814 | |
Inparanoid | 1 | 1.050 | 351 | 1.000 | Inparanoid score | I2256 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1174754at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002911 | |
OrthoInspector | 1 | 1.000 | - | - | otm44266 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106440 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR24208 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2568 |
SonicParanoid | 1 | 1.000 | - | - | X1144 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.860 |