DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10700 and MDAR4

DIOPT Version :9

Sequence 1:NP_609942.1 Gene:CG10700 / 35183 FlyBaseID:FBgn0032754 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_189420.1 Gene:MDAR4 / 822402 AraportID:AT3G27820 Length:488 Species:Arabidopsis thaliana


Alignment Length:397 Identity:108/397 - (27%)
Similarity:175/397 - (44%) Gaps:68/397 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 FVVVGGG-PSGAVCVETLRQEGFTGRLTLVCGEKHLPYDRTRIMNLLNTYTKNLALRE------- 190
            :|::||| .:|...:|..|:....|.|.::..|...||:|..:       :|...|.|       
plant     7 YVILGGGVAAGYAALEFTRRGVSDGELCIISEEPVAPYERPAL-------SKGFLLPEAPARLPS 64

  Fly   191 -------------EQFYKDYGIEMQLGVSAERLDTNCNTLHCTNGKTFPYDKIYIATGYSAVTP- 241
                         .::|||:|||:.||...:.:|....||..:.|:|..|..:.||||..|:.. 
plant    65 FHTCVGANDEKLTPKWYKDHGIELVLGTRVKSVDVRRKTLLSSTGETISYKFLIIATGARALKLE 129

  Fly   242 --NIPGVHLKNVKVIRNIGDARSIFKMVDKST--QVVCLGSSFMAVEATANLVSRARSVTLVARQ 302
              .:.|...:||..:|::.||..:..::..|:  ..|.:|..::.:|..|:||....:||:|   
plant   130 EFGVEGSDAENVCYLRDLADANRLATVIQSSSNGNAVVIGGGYIGMECAASLVINKINVTMV--- 191

  Fly   303 NVPFKSTLGELIGQRILKLLEENKVDLRMSSGIIRILG--------NSRGEVVAVKLLDNSRIPC 359
             .|....:..|...:|..|.|    |...:.|:..|.|        :|..:|.||.|.|.|.:|.
plant   192 -FPEAHCMARLFTPKIASLYE----DYYRAKGVKFIKGTVLTSFEFDSNKKVTAVNLKDGSHLPA 251

  Fly   360 NLLILGTGCQCNTDFLQRSGININPNGSVDVNDFLQTKVRNVYVGGDIANAYILGGFPDRV---- 420
            :|:::|.|.:.||...:  |......|.:.||..:|:...:||..||:|.      ||.::    
plant   252 DLVVVGIGIRPNTSLFE--GQLTIEKGGIKVNSRMQSSDSSVYAIGDVAT------FPVKLFGEM 308

  Fly   421 -NISHYGLAQYHGR--IAALNMSGHIAKLEAIPFFYTVIFGRAFRSAGYG-PFKDVVIDGSLED- 480
             .:.|...|:...|  ::|:.........:.:||||:.:|  ||....|| |..|||..|..|| 
plant   309 RRLEHVDSARKSARHAVSAIMDPIKTGDFDYLPFFYSRVF--AFSWQFYGDPTGDVVHFGEYEDG 371

  Fly   481 LQFVAYF 487
            ..|.||:
plant   372 KSFGAYW 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10700NP_609942.1 Rieske_AIFL_N 10..106 CDD:239560
Pyr_redox_2 135..414 CDD:285266 83/312 (27%)
Pyr_redox 273..350 CDD:278498 21/84 (25%)
COG3393 336..>508 CDD:225928 50/169 (30%)
Reductase_C 464..527 CDD:291425 12/26 (46%)
MDAR4NP_189420.1 Pyr_redox_2 29..321 CDD:400379 80/314 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 116 1.000 Domainoid score I1964
eggNOG 1 0.900 - - E1_COG0446
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H135034
Inparanoid 1 1.050 117 1.000 Inparanoid score I2003
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D405030at2759
OrthoFinder 1 1.000 - - FOG0001279
OrthoInspector 1 1.000 - - mtm1154
orthoMCL 1 0.900 - - OOG6_100481
Panther 1 1.100 - - O PTHR43557
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.830

Return to query results.
Submit another query.