DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10700 and Aifm3

DIOPT Version :9

Sequence 1:NP_609942.1 Gene:CG10700 / 35183 FlyBaseID:FBgn0032754 Length:539 Species:Drosophila melanogaster
Sequence 2:XP_008767097.1 Gene:Aifm3 / 303786 RGDID:1306028 Length:608 Species:Rattus norvegicus


Alignment Length:524 Identity:194/524 - (37%)
Similarity:302/524 - (57%) Gaps:22/524 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VCHKLEVQENEMRQVDASGIPSILLVKQSGILRAVGAMCPHRGAPLAKGVLSRNRVRCPWHGVCF 76
            |||..:::..:||:|:. |...:||||.:|...|:|..|||.||||.||||||.||||||||.||
  Rat    72 VCHVKDLENGQMREVEL-GWGKVLLVKDNGEFHALGHKCPHYGAPLVKGVLSRGRVRCPWHGACF 135

  Fly    77 NLETGDIENFPGLDSLPCHRVNVDSRGQVLVQVKRSYLLRHARIKSMA-CRN---WQDQRHFVVV 137
            |:.|||:|:|||||||...:|.:: :.:|.|:..:..|....|.|.|| |.:   .....:.::|
  Rat   136 NIGTGDLEDFPGLDSLHKFQVKIE-KEKV
TVRASKQALQLQRRTKVMAKCISPSAGHSSTNVLIV 199

  Fly   138 GGGPSGAVCVETLRQEGFTGRLTLVCGEKHLPYDRTRIMNLLNTYTKNLALREEQFYKDYGIEMQ 202
            |.|.:|.||.||||||||:.|:.|...::||||||.::...|:...:.||||.::|::.|||||.
  Rat   200 GAGAAGLVCAETLRQEGFSDRIVLCTLDRHLPYDRAKLSKSLDAQPEQLALRPKEFFRAYGIEML 264

  Fly   203 LGVSAERLDTNCNTLHCTNGKTFPYDKIYIATGYSAVTPNIPGVHLKNVKVIRNIGDARSIFKMV 267
            .......:|.....:...:|....|.|:.:|.|.|..|....|..::||..||...||..:.::.
  Rat   265 TEAQVVTVDVRNKKVVFKDGFKLEYSKLLLAPGSSPKTLTCKGKDIENVFTIRTPEDANRVLRLA 329

  Fly   268 DKSTQVVCLGSSFMAVEATANLVSRARSVTLVARQNVPFKSTLGELIGQRILKLLEENKVDLRMS 332
             :....|.:|:.|:.:|..|.|..:|.||::|..:..||:..|||.:|:.::|:.|.|:|...|.
  Rat   330 -RGRNAVVVGAGFLGMEVAAYLTEKAHSVSVVELEETPFRRFLGERVGRALMKMFENNRVKFYMQ 393

  Fly   333 SGIIRILGNSRGEVVAVKLLDNSRIPCNLLILGTGCQCNTDFLQRSGININPNGSVDVNDFLQTK 397
            :.:.. |....|::..|.|..:..:..::.::|.|....|.||::|||.::..|.:.||..:||.
  Rat   394 TEVSE-LRAQEGKLQEVVLKSSKVLRADVCVVGIGAVPATGFLRQSGIGLDSRGFIPVNKMMQTN 457

  Fly   398 VRNVYVGGDIANAYILGGFP------DRVNISHYGLAQYHGRIAALNMSGHIAKLEAIPFFYTVI 456
            :..|:..||...      ||      .:|||.|:.:|...||:||.||....|::..:|:.:|.:
  Rat   458 IPGVFAAGDAVT------FPLAWRNNRKVNIPHWQMAHAQGRVAAQNMLAQEAEINTVPYLWTAM 516

  Fly   457 FGRAFRSAGYGP-FKDVVIDGSLEDLQFVAYFFDDYDKVTAVASCGRDPMVAQFAELVSQGKELC 520
            ||::.|.||||. |.||:|.|.||:|:||| |:...|:|.||||...||:|::.||:::.|:.:.
  Rat   517 FGKSLRYAGYGEGFDDVIIQGDLEELKFVA-FYTKGDEVIAVASMNYDPIVSKVAEVLASGRAIR 580

  Fly   521 RCQI 524
            :.::
  Rat   581 KREV 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10700NP_609942.1 Rieske_AIFL_N 10..106 CDD:239560 50/93 (54%)
Pyr_redox_2 135..414 CDD:285266 89/278 (32%)
Pyr_redox 273..350 CDD:278498 23/76 (30%)
COG3393 336..>508 CDD:225928 64/178 (36%)
Reductase_C 464..527 CDD:291425 28/62 (45%)
Aifm3XP_008767097.1 Rieske_AIFL_N 70..163 CDD:239560 50/92 (54%)
Pyr_redox_2 194..492 CDD:400379 96/305 (31%)
Reductase_C 511..>561 CDD:405449 26/50 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 187 1.000 Domainoid score I3238
eggNOG 1 0.900 - - E1_COG0446
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 366 1.000 Inparanoid score I2094
OMA 1 1.010 - - QHG58553
OrthoDB 1 1.010 - - D183405at33208
OrthoFinder 1 1.000 - - FOG0001279
OrthoInspector 1 1.000 - - otm44669
orthoMCL 1 0.900 - - OOG6_100481
Panther 1 1.100 - - O PTHR43557
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1666
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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