DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10702 and let-23

DIOPT Version :9

Sequence 1:NP_001188841.1 Gene:CG10702 / 35181 FlyBaseID:FBgn0032752 Length:946 Species:Drosophila melanogaster
Sequence 2:NP_001300607.1 Gene:let-23 / 174462 WormBaseID:WBGene00002299 Length:1335 Species:Caenorhabditis elegans


Alignment Length:574 Identity:132/574 - (22%)
Similarity:223/574 - (38%) Gaps:146/574 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GNMLLGVGLMFLA----------LYVPCAESKKEHECT--SIDIRNE---CKNMHLLDNCTVVTG 53
            ||:|..:..|:..          .::...|.||..|.|  ::|.:||   .|:::..||...:.|
 Worm    65 GNILEDLETMYRGCRRVYGNLEITWIEANEIKKWRESTNSTVDPKNEDSPLKSINFFDNLEEIRG 129

  Fly    54 YVMITLITIEQRCNFSEYSYPLLTEITEFMIFTDVRGLVNITEMFPHLTVIRGRRLFLNYALGVT 118
            .::|      .|.|..:.|                         ||.|.||.|..:|.:.||.:.
 Worm   130 SLII------YRANIQKIS-------------------------FPRLRVIYGDEVFHDNALYIH 163

  Fly   119 NMHELEQLVFPKLVAIQRGQVYIGSCPKLCSIG-RVNWDLLTLTRGENNIIMVN--KNC-----S 175
            ...::.::|..:|..|:.|.|.|...||:|.|| :::|..|........:...|  ::|     |
 Worm   164 KNDKVHEVVMRELRVIRNGSVTIQDNPKMCYIGDKIDWKELLYDPDVQKVETTNSHQHCYQNGKS 228

  Fly   176 TPVCSGCSSSHCW--SNHYCQRSINENV----------ANPKANINACHEECLGGCKNNSSSPAD 228
            ...|....:..||  .::.||| :..:|          :|..::...|...|||||..:  .|.:
 Worm   229 MAKCHESCNDKCWGSGDNDCQR-VYRSVCPKSCSQCFYSNSTSSYECCDSACLGGCTGH--GPKN 290

  Fly   229 CSVCRGLSDDGVCVKSCPKDKYV--------------MENYQRCYTKAECVLKHGYVISGSQCVA 279
            |..|.....||:|:::||..|..              .:|...|.  .||..:  .:|....||.
 Worm   291 CIACSKYELDGICIETCPSRKIFNHKTGRLVFNPDGRYQNGNHCV--KECPPE--LLIENDVCVR 351

  Fly   280 FCPSGY---KTNNRSECVLCSPDEACISFCTPEWPGKAFTVYNLADAENLRGCQIFNGSLVI--- 338
            .|..|:   .|.:..||..|. ..:|...||.:......|:      :||.||:..:|.|:|   
 Worm   352 HCSDGHHYDATKDVRECEKCR-SSSCPKICTVDGHLTNETL------KNLEGCEQIDGHLIIEHA 409

  Fly   339 -TIRN-KVNETQLYQSFTSMREVRGHVKVYRSSQLRSLQFLRNLERVHGDPLENRHYSFILYDNK 401
             |... ||.||        ::.|..::.:.:.: ...|:||:||:.:.|..|.|..::..:|...
 Worm   410 FTYEQLKVLET--------VKIVSEYITIVQQN-FYDLKFLKNLQIIEGRKLHNVRWALAIYQCD 465

  Fly   402 ELSELWTPSRQLEFMEGGMFMHRNNKLC-----------------NR------RMREFQNAVTHD 443
            :|.||...|.:| ...|.:.:.:|::||                 |:      ..|:.:...|..
 Worm   466 DLEELSLNSLKL-IKTGAVLIMKNHRLCYVSKIDWSSIITSKGKDNKPSLAIAENRDSKLCETEQ 529

  Fly   444 RALDSLQTNDQEVQCSPLKLQLYVQKRTHRSV--------KLSWLKSQTSQKIE 489
            |..|.   |..:..|...:.:..::.:|.:||        ...:|::|||.|.|
 Worm   530 RVCDK---NCNKRGCWGKEPEDCLECKTWKSVGTCVEKCDTKGFLRNQTSMKCE 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10702NP_001188841.1 Recep_L_domain 47..159 CDD:279382 27/112 (24%)
Furin-like 171..297 CDD:279142 38/161 (24%)
FU 210..258 CDD:238021 16/61 (26%)
Recep_L_domain 328..441 CDD:279382 31/140 (22%)
let-23NP_001300607.1 Recep_L_domain 77..205 CDD:279382 37/158 (23%)
Furin-like 229..378 CDD:279142 37/156 (24%)
FU 274..>308 CDD:238021 12/35 (34%)
Recep_L_domain 396..503 CDD:279382 29/116 (25%)
GF_recep_IV 531..652 CDD:291509 12/53 (23%)
FU 532..580 CDD:238021 11/50 (22%)
FU 578..625 CDD:214589 2/3 (67%)
FU 759..806 CDD:214589
PKc_like 885..1164 CDD:304357
TyrKc 898..1153 CDD:197581
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7713
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.860

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