DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phlpp and AT1G56540

DIOPT Version :9

Sequence 1:NP_001260558.1 Gene:Phlpp / 35178 FlyBaseID:FBgn0032749 Length:954 Species:Drosophila melanogaster
Sequence 2:NP_176047.1 Gene:AT1G56540 / 842107 AraportID:AT1G56540 Length:1096 Species:Arabidopsis thaliana


Alignment Length:475 Identity:106/475 - (22%)
Similarity:167/475 - (35%) Gaps:155/475 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKATRKQA----DPYKSKLKVSASHSGPHPLPVEVTAAEEEQAATFGQTSPQKLSLKGSQLGGS 61
            :||...:|.    :|:|.::.|...         |::...|....            .||..|.|
plant   490 LLKVMARQVISKQEPWKRQILVDTQ---------EISYVLENAEG------------NGSIAGIS 533

  Fly    62 ILIGNYNYLT--------------------------QLEVCENEMEVLDLSSLAQLE-----TLK 95
            ..:|..|.||                          |:.:.| ||:.|...||.:.:     ||.
plant   534 FDVGEINKLTISAKAFERMHNLLLLKVYDPWFTGKGQVHIPE-EMDFLPRLSLLRWDAYTRKTLP 597

  Fly    96 ---CSRNKLMELIINGTNLQTLVADHNYLHNISTTNTHPVPLKLQRIDISHNNFSELPNWVGA-- 155
               |..| |:||.:..:.|:.|......|.|:.|       :||.|    .:...||||...|  
plant   598 RRFCPEN-LVELNMPDSQLEKLWEGTQLLANLKT-------MKLSR----SSRLKELPNLSNAKN 650

  Fly   156 --------CASLTAINASHNRLNNVAVLLRNY--------RITELVSLDLAYNDLK-----QLDQ 199
                    |.:|..:.:|.:.|:.:..|..|:        .:|.||||:    |:|     :|..
plant   651 LERLDLHECVALLELPSSISNLHKLYFLETNHCRRLQVIPTLTNLVSLE----DIKMMGCLRLKS 711

  Fly   200 FPEGFSSIRSLQLQSNELPSLPDNFFAVTHARLETLNVSCNKLSTLPRYEQNNHAALVNLSLAGN 264
            ||:..::|..|.:....:...|.:....:|  :|:.::|                ..|||.....
plant   712 FPDIPANIIRLSVMETTIAEFPASLRHFSH--IESFDIS----------------GSVNLKTFST 758

  Fly   265 HLNDSIFEPLHNAAKLRVLHLAYNRIGVLPAACVRNWPELEILVLSG-NMLQQLPEEVATLGQLR 328
            .|..|:.|          ||:..:.|..: ..|::....|.:|.||. ..|..||:..::|..||
plant   759 LLPTSVTE----------LHIDNSGIESI-TDCIKGLHNLRVLALSNCKKLTSLPKLPSSLKWLR 812

  Fly   329 VLRCCN----NLLLCTPQLAKLAMLKVLDLSH-NHLDR-----------VNLLALVPSRNLKYL- 376
            ...|.:    :..|.||...       ||.|: ..|||           |:..||:|.|.:..| 
plant   813 ASHCESLERVSEPLNTPNAD-------LDFSNCFKLDRQARQAIFQQRFVDGRALLPGRKVPALF 870

  Fly   377 --DLSGNLQLQVDEQQFKVC 394
              ...||.....:...:|||
plant   871 DHRARGNSLTIPNSASYKVC 890

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhlppNP_001260558.1 leucine-rich repeat 91..110 CDD:275380 7/26 (27%)
LRR_8 109..169 CDD:290566 16/69 (23%)
leucine-rich repeat 111..135 CDD:275380 5/23 (22%)
leucine-rich repeat 136..158 CDD:275380 8/31 (26%)
leucine-rich repeat 159..183 CDD:275380 5/31 (16%)
leucine-rich repeat 184..209 CDD:275380 10/29 (34%)
LRR_8 205..266 CDD:290566 9/60 (15%)
leucine-rich repeat 210..230 CDD:275380 2/19 (11%)
leucine-rich repeat 232..255 CDD:275380 2/22 (9%)
LRR_RI <256..410 CDD:238064 41/159 (26%)
leucine-rich repeat 256..276 CDD:275380 6/19 (32%)
LRR_8 279..359 CDD:290566 21/85 (25%)
leucine-rich repeat 280..303 CDD:275380 4/22 (18%)
leucine-rich repeat 304..348 CDD:275380 14/48 (29%)
leucine-rich repeat 349..372 CDD:275380 10/34 (29%)
PP2Cc 461..655 CDD:294085
AT1G56540NP_176047.1 PLN03210 11..1040 CDD:215633 106/475 (22%)
TIR 15..180 CDD:279864
AAA_16 189..312 CDD:289934
LRR_3 604..623 CDD:285026 6/19 (32%)
leucine-rich repeat 605..627 CDD:275380 6/21 (29%)
leucine-rich repeat 628..650 CDD:275380 9/32 (28%)
leucine-rich repeat 651..674 CDD:275380 4/22 (18%)
leucine-rich repeat 675..697 CDD:275380 4/21 (19%)
leucine-rich repeat 698..721 CDD:275380 7/26 (27%)
leucine-rich repeat 764..786 CDD:275380 5/32 (16%)
leucine-rich repeat 787..807 CDD:275380 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X32
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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