DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phlpp and WRR4

DIOPT Version :9

Sequence 1:NP_001260558.1 Gene:Phlpp / 35178 FlyBaseID:FBgn0032749 Length:954 Species:Drosophila melanogaster
Sequence 2:NP_176043.1 Gene:WRR4 / 842104 AraportID:AT1G56510 Length:1007 Species:Arabidopsis thaliana


Alignment Length:357 Identity:80/357 - (22%)
Similarity:134/357 - (37%) Gaps:117/357 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 LMELIINGTNLQTLVADHNYLHNISTTNTHPVPLKLQRIDISHNN-FSELPN----------WVG 154
            |:|:.:..:.||.|......|.|            |::||:|.:: .:|||:          :||
plant   603 LVEVNMQDSELQKLWEGTQCLAN------------LKKIDLSRSSCLTELPDLSNATNLEDLYVG 655

  Fly   155 ACASLTAINASHNRLNNVA-----------VLLRNYRITELVSLDLAYNDLKQLDQFPEGFSSIR 208
            :|.:|..:.:|...|:.:|           |:.....:|.|..|::  |...:|.:||:..:||.
plant   656 SCTALVELPSSIGNLHKLAHIMMYSCESLEVIPSLINLTSLTFLNM--NKCSRLRRFPDIPTSIE 718

  Fly   209 SLQLQSNELPSLPDNFFAVTHARLETLNVSCNKLSTLPRYEQNNHAALVNLSLAGNHLNDSIFEP 273
            .:|:....|..||   .::||         |:.|.|              :.::|: :|..||  
plant   719 DVQVTGTTLEELP---ASLTH---------CSGLQT--------------IKISGS-VNLKIF-- 754

  Fly   274 LHNAAKLRVLHLAYNRIGV--LPAACVRNWPELEILVLSG-NMLQQLPEEVATLGQLRVLRCCN- 334
             :....:.|.|:..:..|:  :...|::....|..|.||| ..|..|||...:|..|:...|.: 
plant   755 -YTELPVSVSHINISNSGIEWITEDCIKGLHNLHDLCLSGCKRLVSLPELPRSLKILQADDCDSL 818

  Fly   335 ---NLLLCTPQLAKL-------------------------AMLKVLDL--SHNHLDRVNLLALVP 369
               |..|.||. |:|                         |:|..|::  ...|..|.|.|.:..
plant   819 ESLNGHLNTPN-AELYFANCFKLDAEARRAIIQQSFVSGWALLPGLEVPPEFGHRARGNSLIIPY 882

  Fly   370 SRNLKYLDLSGNLQLQVDEQQFKVCQSQSQRH 401
            |.:                .:||||...|..|
plant   883 SAS----------------NRFKVCVVMSLNH 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhlppNP_001260558.1 leucine-rich repeat 91..110 CDD:275380 2/8 (25%)
LRR_8 109..169 CDD:290566 17/70 (24%)
leucine-rich repeat 111..135 CDD:275380 5/23 (22%)
leucine-rich repeat 136..158 CDD:275380 10/32 (31%)
leucine-rich repeat 159..183 CDD:275380 5/34 (15%)
leucine-rich repeat 184..209 CDD:275380 8/24 (33%)
LRR_8 205..266 CDD:290566 12/60 (20%)
leucine-rich repeat 210..230 CDD:275380 5/19 (26%)
leucine-rich repeat 232..255 CDD:275380 3/22 (14%)
LRR_RI <256..410 CDD:238064 40/180 (22%)
leucine-rich repeat 256..276 CDD:275380 4/19 (21%)
LRR_8 279..359 CDD:290566 25/113 (22%)
leucine-rich repeat 280..303 CDD:275380 4/24 (17%)
leucine-rich repeat 304..348 CDD:275380 18/73 (25%)
leucine-rich repeat 349..372 CDD:275380 7/24 (29%)
PP2Cc 461..655 CDD:294085
WRR4NP_176043.1 PLN03210 1..997 CDD:215633 80/357 (22%)
TIR 13..176 CDD:279864
AAA_16 187..310 CDD:289934
LRR_3 602..621 CDD:285026 5/17 (29%)
leucine-rich repeat 603..621 CDD:275380 5/17 (29%)
leucine-rich repeat 626..648 CDD:275381 7/21 (33%)
leucine-rich repeat 649..695 CDD:275381 8/45 (18%)
leucine-rich repeat 696..739 CDD:275381 15/56 (27%)
leucine-rich repeat 740..785 CDD:275381 10/62 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X32
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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