DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Phlpp and AT5G41750

DIOPT Version :9

Sequence 1:NP_001260558.1 Gene:Phlpp / 35178 FlyBaseID:FBgn0032749 Length:954 Species:Drosophila melanogaster
Sequence 2:NP_198990.3 Gene:AT5G41750 / 834178 AraportID:AT5G41750 Length:1068 Species:Arabidopsis thaliana


Alignment Length:284 Identity:65/284 - (22%)
Similarity:115/284 - (40%) Gaps:87/284 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 IGNYNYLTQLEV-----CENEME----VLDLSSLAQLETLKCSRNKLMELIINGTNLQTLVADHN 119
            |.|.:..|.||:     |::.:|    :|:|..|..|....||..|::...||..:|:.|     
plant   642 IPNLSKATNLEILSLEFCKSLVELPFSILNLHKLEILNVENCSMLKVIPTNINLASLERL----- 701

  Fly   120 YLHNISTTNTHP-VPLKLQRIDISHNNFSELPNWVGACASLTAINASHNRLNNVAVLLRNYRITE 183
            .:...|...|.| :...::::::......::|..|| |.|         ||:::.:..|:     
plant   702 DMTGCSELRTFPDISSNIKKLNLGDTMIEDVPPSVG-CWS---------RLDHLYIGSRS----- 751

  Fly   184 LVSLDLAYNDLKQLDQFPEGFSSIRSLQLQSNELPSLPDNFFAVTHARLETLNV-SCNKL----- 242
                      ||:|...|    .|.||.|..:.:.|:|::...:|  ||:.||| ||.||     
plant   752 ----------LKRLHVPP----CITSLVLWKSNIESIPESIIGLT--RLDWLNVNSCRKLKSILG 800

  Fly   243 --STLPRYEQNNHAALVNLSLAGNHLNDSIFEPLHNAAKLRVLHLAYN---------RIGVLPAA 296
              |:|...:.|:..:|..:..:           .||..:.    |::|         |.|::..:
plant   801 LPSSLQDLDANDCVSLKRVCFS-----------FHNPIRA----LSFNNCLNLDEEARKGIIQQS 850

  Fly   297 CVRNWPELEILVLSGNMLQQLPEE 320
            ..|      .:.|.|   :::|||
plant   851 VYR------YICLPG---KKIPEE 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhlppNP_001260558.1 leucine-rich repeat 91..110 CDD:275380 6/18 (33%)
LRR_8 109..169 CDD:290566 10/60 (17%)
leucine-rich repeat 111..135 CDD:275380 5/24 (21%)
leucine-rich repeat 136..158 CDD:275380 4/21 (19%)
leucine-rich repeat 159..183 CDD:275380 3/23 (13%)
leucine-rich repeat 184..209 CDD:275380 5/24 (21%)
LRR_8 205..266 CDD:290566 20/68 (29%)
leucine-rich repeat 210..230 CDD:275380 5/19 (26%)
leucine-rich repeat 232..255 CDD:275380 11/30 (37%)
LRR_RI <256..410 CDD:238064 13/74 (18%)
leucine-rich repeat 256..276 CDD:275380 1/19 (5%)
LRR_8 279..359 CDD:290566 10/51 (20%)
leucine-rich repeat 280..303 CDD:275380 5/31 (16%)
leucine-rich repeat 304..348 CDD:275380 5/17 (29%)
leucine-rich repeat 349..372 CDD:275380
PP2Cc 461..655 CDD:294085
AT5G41750NP_198990.3 PLN03210 1..1033 CDD:215633 65/284 (23%)
TIR 13..178 CDD:279864
AAA_16 187..>231 CDD:289934
AAA 212..326 CDD:99707
LRR_3 604..623 CDD:285026
leucine-rich repeat 628..650 CDD:275380 2/7 (29%)
leucine-rich repeat 651..674 CDD:275380 6/22 (27%)
leucine-rich repeat 675..697 CDD:275380 7/21 (33%)
leucine-rich repeat 698..718 CDD:275380 5/24 (21%)
leucine-rich repeat 719..751 CDD:275380 7/41 (17%)
leucine-rich repeat 752..783 CDD:275380 11/36 (31%)
leucine-rich repeat 784..815 CDD:275380 11/30 (37%)
leucine-rich repeat 816..837 CDD:275380 5/35 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X32
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.