DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phlpp and AT5G17970

DIOPT Version :9

Sequence 1:NP_001260558.1 Gene:Phlpp / 35178 FlyBaseID:FBgn0032749 Length:954 Species:Drosophila melanogaster
Sequence 2:NP_197298.1 Gene:AT5G17970 / 831664 AraportID:AT5G17970 Length:780 Species:Arabidopsis thaliana


Alignment Length:305 Identity:68/305 - (22%)
Similarity:122/305 - (40%) Gaps:79/305 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 ELIINGTNLQTLVADHNYLHNISTTNTHPVPLKLQRID----ISHNNFSELPN----WVGACASL 159
            :.:::...:..::||..     .|.....:.|.:..|:    :|...|.::||    |       
plant   517 KFLVDSLEISDVLADET-----GTETVLGISLDMSEIEDQVYVSEKAFEKMPNLQFLW------- 569

  Fly   160 TAINASHNRLNNVAVLLRNYRITELVSLDLAYNDLKQLDQFPEGFSSIRSLQLQSNELPSLPDNF 224
                           |.:|:. .|.|.|.|.:.    ||..|.   .:|.|...|.....||..|
plant   570 ---------------LYKNFP-DEAVKLYLPHG----LDYLPR---KLRLLHWDSYPKKCLPSKF 611

  Fly   225 -------FAVTHARLETLNVSCNKLSTLPRYEQNNHAALVNLSLAGNHLNDSIFEPLHNAAKLRV 282
                   ..:..::||.|......|.:|.|         ::|| |...:.|  ...|..|..|..
plant   612 RPEFLVELTMRDSKLEKLWEGIQPLKSLKR---------MDLS-ASTKIKD--IPNLSRATNLEK 664

  Fly   283 LHLAY-NRIGVLPAACVRNWPELEILVLSGNM-LQQLPEEVATLGQLRVL--RCC---NNLLLCT 340
            |:|.: ..:.::|::|::|..:|::|.:|..: |:.||:.: .|..|.||  |.|   ||..|.:
plant   665 LYLRFCKNLVIVPSSCLQNLHKLKVLDMSCCIKLKSLPDNI-NLKSLSVLNMRGCSKLNNFPLIS 728

  Fly   341 PQLAKLAMLKVLDLSHNHLDRVNLLALVPSRNLKYLDLSG--NLQ 383
            .|      ::.:.|....:::|..:..:.|| |..|:::|  ||:
plant   729 TQ------IQFMSLGETAIEKVPSVIKLCSR-LVSLEMAGCKNLK 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhlppNP_001260558.1 leucine-rich repeat 91..110 CDD:275380 0/6 (0%)
LRR_8 109..169 CDD:290566 10/67 (15%)
leucine-rich repeat 111..135 CDD:275380 3/23 (13%)
leucine-rich repeat 136..158 CDD:275380 6/29 (21%)
leucine-rich repeat 159..183 CDD:275380 2/23 (9%)
leucine-rich repeat 184..209 CDD:275380 6/24 (25%)
LRR_8 205..266 CDD:290566 15/67 (22%)
leucine-rich repeat 210..230 CDD:275380 5/26 (19%)
leucine-rich repeat 232..255 CDD:275380 6/22 (27%)
LRR_RI <256..410 CDD:238064 37/137 (27%)
leucine-rich repeat 256..276 CDD:275380 5/19 (26%)
LRR_8 279..359 CDD:290566 23/86 (27%)
leucine-rich repeat 280..303 CDD:275380 6/23 (26%)
leucine-rich repeat 304..348 CDD:275380 16/49 (33%)
leucine-rich repeat 349..372 CDD:275380 3/22 (14%)
PP2Cc 461..655 CDD:294085
AT5G17970NP_197298.1 PLN03210 16..>766 CDD:215633 67/303 (22%)
leucine-rich repeat 565..593 CDD:275380 10/57 (18%)
leucine-rich repeat 594..615 CDD:275380 6/20 (30%)
leucine-rich repeat 616..638 CDD:275380 4/21 (19%)
leucine-rich repeat 639..661 CDD:275380 8/33 (24%)
leucine-rich repeat 662..686 CDD:275380 6/23 (26%)
leucine-rich repeat 687..709 CDD:275380 7/22 (32%)
leucine-rich repeat 731..753 CDD:275381 2/21 (10%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X32
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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