DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phlpp and CSA1

DIOPT Version :9

Sequence 1:NP_001260558.1 Gene:Phlpp / 35178 FlyBaseID:FBgn0032749 Length:954 Species:Drosophila melanogaster
Sequence 2:NP_197290.1 Gene:CSA1 / 831656 AraportID:AT5G17880 Length:1197 Species:Arabidopsis thaliana


Alignment Length:440 Identity:92/440 - (20%)
Similarity:159/440 - (36%) Gaps:130/440 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 QKLSLKGSQLGGSILIG--NYNYLTQLEV--CEN----------EMEVLDLSSLAQLETLKCSRN 99
            |:|:|:|......:.:.  |..:|..|.:  |.:          .::.|.||..::.:|.:...:
plant   686 QELNLEGCTALKEMHVDMENMKFLVFLNLRGCTSLKSLPEIQLISLKTLILSGCSKFKTFQVISD 750

  Fly   100 KLMELIINGTNLQTLVADHNYLHNISTTNTHPVPLKLQRIDISHNNFSELPNWV-GACASLTAIN 163
            ||..|.::||.::.|..|...|..:...|..... ||:|:..|......|...: ..|:.|....
plant   751 KLEALYLDGTAIKELPCDIGRLQRLVMLNMKGCK-KLKRLPDSLGQLKALEELILSGCSKLNEFP 814

  Fly   164 ASHNRLNNVAVLLRNYRITELVSLDLAYNDLKQLDQFPEGFSSIRSLQLQSNE-LPSLPD--NFF 225
            .:...::.:.:||.:         :.|..|:.::       .|:|.|.|..|| :..|||  |.|
plant   815 ETWGNMSRLEILLLD---------ETAIKDMPKI-------LSVRRLCLNKNEKISRLPDLLNKF 863

  Fly   226 A------------VTHA-----RLETLNV-SCNKLSTLPRYEQNNHAALVNLSLAGNHLNDS-IF 271
            :            :||.     .|:.||| .|:.|.|:.:       .|| .|:...|:|.| ||
plant   864 SQLQWLHLKYCKNLTHVPQLPPNLQYLNVHGCSSLKTVAK-------PLV-CSIPMKHVNSSFIF 920

  Fly   272 ---EPLHNAAKLRVLHLAYNRIGVLPAACVRNWPELEILVLSGNMLQQLPEEVATLGQLRVLRCC 333
               ..|..|||..::..|..:..:|.:|                 |::..|.           |.
plant   921 TNCNELEQAAKEEIVVYAERKCHLLASA-----------------LKRCDES-----------CV 957

  Fly   334 NNLLLCT-------PQLAK---LAMLKVLDL----SHNHLDRVNLLALVPSRNLKYLDLSGNLQL 384
            ..:|.||       |....   :..:...:|    :||.|..:.|..:|                
plant   958 PEILFCTSFPGCEMPSWFSHDAIGSMVEFELPPHWNHNRLSGIALCVVV---------------- 1006

  Fly   385 QVDEQQFKVCQSQSQR--HWSLVDVSGNNRAALPTTKIRQVSAQRNQNKT 432
                 .||.|:|.:..  .:|....:|...::..|.|:..:..|.||.:|
plant  1007 -----SFKNCKSHANLIVKFSCEQNNGEGSSSSITWKVGSLIEQDNQEET 1051

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhlppNP_001260558.1 leucine-rich repeat 91..110 CDD:275380 5/18 (28%)
LRR_8 109..169 CDD:290566 12/60 (20%)
leucine-rich repeat 111..135 CDD:275380 4/23 (17%)
leucine-rich repeat 136..158 CDD:275380 5/22 (23%)
leucine-rich repeat 159..183 CDD:275380 3/23 (13%)
leucine-rich repeat 184..209 CDD:275380 3/24 (13%)
LRR_8 205..266 CDD:290566 23/81 (28%)
leucine-rich repeat 210..230 CDD:275380 10/34 (29%)
leucine-rich repeat 232..255 CDD:275380 7/23 (30%)
LRR_RI <256..410 CDD:238064 33/173 (19%)
leucine-rich repeat 256..276 CDD:275380 9/23 (39%)
LRR_8 279..359 CDD:290566 14/93 (15%)
leucine-rich repeat 280..303 CDD:275380 3/22 (14%)
leucine-rich repeat 304..348 CDD:275380 7/53 (13%)
leucine-rich repeat 349..372 CDD:275380 6/26 (23%)
PP2Cc 461..655 CDD:294085
CSA1NP_197290.1 TIR 18..179 CDD:279864
NB-ARC 207..473 CDD:279299
AAA_16 211..317 CDD:289934
LRR <599..922 CDD:227223 60/260 (23%)
LRR_3 638..657 CDD:285026
leucine-rich repeat 639..661 CDD:275381
leucine-rich repeat 662..684 CDD:275380
leucine-rich repeat 685..708 CDD:275380 5/21 (24%)
leucine-rich repeat 709..730 CDD:275380 3/20 (15%)
leucine-rich repeat 731..751 CDD:275380 4/19 (21%)
leucine-rich repeat 752..774 CDD:275380 7/21 (33%)
leucine-rich repeat 775..798 CDD:275380 5/23 (22%)
leucine-rich repeat 799..822 CDD:275380 3/22 (14%)
leucine-rich repeat 842..865 CDD:275380 10/22 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X32
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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