DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phlpp and AT4G16960

DIOPT Version :9

Sequence 1:NP_001260558.1 Gene:Phlpp / 35178 FlyBaseID:FBgn0032749 Length:954 Species:Drosophila melanogaster
Sequence 2:NP_001319971.1 Gene:AT4G16960 / 827404 AraportID:AT4G16960 Length:1001 Species:Arabidopsis thaliana


Alignment Length:354 Identity:80/354 - (22%)
Similarity:147/354 - (41%) Gaps:81/354 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 GSQLGGSI---LIGNYNYLTQL-----------------EVCENEMEVLDLSSLAQLETLKCSR- 98
            |:||.||:   ::.|..||.::                 ||.|:....|:..||..|:.|:|.: 
plant   627 GTQLLGSLKKMILRNSKYLKEIPDLSYAMNLERLDISDCEVLESFPSPLNSESLEYLDLLRCPKL 691

  Fly    99 ----NKLMELIINGTNLQTLVAD---------HNYLHNISTTN------THPVPLKLQRIDISHN 144
                ..:|::...|.::.  |||         .:||..:...|      .|.|.|||:    .:|
plant   692 RNFPETIMQISPYGIDID--VADCLWNKSLPGLDYLDCLRRCNPSKFLPEHLVNLKLR----GNN 750

  Fly   145 NFSELPNWVGACASLTAINASHNRLNNVAVLLRNYRITELVSLDLAYNDLKQLDQFPEGFSSIRS 209
            ...:|...|.:...|..::.|  ...|:..:....:.|.||:|:|  ::.|.|...|....:.:.
plant   751 MLEKLWEGVQSLGKLERMDLS--ECENLIEIPDLSKATNLVNLNL--SNCKSLVTLPSTIGNHQK 811

  Fly   210 L-QLQSNELPSLPDNFFAVTHARLETLNV-SCNKLSTLPRYEQNNHAALVNLSLAGNHLNDSIFE 272
            | .|:..|...|......|..:.|.|:|: .|:.|...|:         ::.|:|..:|:|:..|
plant   812 LYTLEMKECTGLKVLPMDVNLSSLHTVNLKGCSSLRFFPQ---------ISKSIAVLNLDDTAIE 867

  Fly   273 PL---HNAAKLRVLHLAYNRIGVLPAAC--VRNWPE----LEILVLSGNMLQQLPEEVATLGQLR 328
            .:   .|.::|.||.:         ..|  :|.:|:    ::.|.|:...::|:|..:....:|:
plant   868 EVPCFENFSRLIVLSM---------RGCKSLRRFPQISTSIQELNLADTAIEQVPCFIENFSKLK 923

  Fly   329 VLRC--CNNLLLCTPQLAKLAMLKVLDLS 355
            :|..  |..|...:|.:.:|..||.:|.:
plant   924 ILNMSGCKKLKNISPNIFRLTWLKKVDFT 952

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhlppNP_001260558.1 leucine-rich repeat 91..110 CDD:275380 5/23 (22%)
LRR_8 109..169 CDD:290566 16/74 (22%)
leucine-rich repeat 111..135 CDD:275380 8/38 (21%)
leucine-rich repeat 136..158 CDD:275380 4/21 (19%)
leucine-rich repeat 159..183 CDD:275380 3/23 (13%)
leucine-rich repeat 184..209 CDD:275380 7/24 (29%)
LRR_8 205..266 CDD:290566 13/62 (21%)
leucine-rich repeat 210..230 CDD:275380 5/20 (25%)
leucine-rich repeat 232..255 CDD:275380 6/23 (26%)
LRR_RI <256..410 CDD:238064 25/111 (23%)
leucine-rich repeat 256..276 CDD:275380 5/22 (23%)
LRR_8 279..359 CDD:290566 19/85 (22%)
leucine-rich repeat 280..303 CDD:275380 5/24 (21%)
leucine-rich repeat 304..348 CDD:275380 10/45 (22%)
leucine-rich repeat 349..372 CDD:275380 3/7 (43%)
PP2Cc 461..655 CDD:294085
AT4G16960NP_001319971.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X32
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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