DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Phlpp and Lrriq4

DIOPT Version :9

Sequence 1:NP_001260558.1 Gene:Phlpp / 35178 FlyBaseID:FBgn0032749 Length:954 Species:Drosophila melanogaster
Sequence 2:XP_011248011.1 Gene:Lrriq4 / 68307 MGIID:1915557 Length:599 Species:Mus musculus


Alignment Length:565 Identity:127/565 - (22%)
Similarity:207/565 - (36%) Gaps:172/565 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VSASHSGPHPLPVEVTAAEE--------EQAATFGQTSPQKLSLKGSQLGGSIL------IGNYN 68
            :..|:.|...:|.|:.|.:|        .|.|...|...|..:.|...|..:.|      :|..:
Mouse    69 IDGSNQGLKTIPSEILALKELEEVHLENNQIAEIPQGIQQLQNTKVLYLHNNSLQDLCPELGALS 133

  Fly    69 YLTQLEVCENEMEVLDLSSLAQLETLK----------------C-----------SRN---KLME 103
            .|..|::..|.:.:..|..:::|.||:                |           |.|   .|.|
Mouse   134 SLESLDLSGNPLVISSLHVVSRLRTLRELRLYRTGLTEIPTGICKSLHHLELFGLSENFLESLPE 198

  Fly   104 LIINGT-----------------------NLQTLVADHNYLHNISTTNTHPVPLKLQRIDISHNN 145
            .|:|.|                       ||:.:..|.|.|.:|.....|.|  :||:..::.|:
Mouse   199 EIVNQTKLREIYLKQNHFEVFPCDLCVLYNLEVIDLDENKLKSIPGDIGHLV--RLQKFYVASNH 261

  Fly   146 FSELPNWVGACASLTAINASHNRLNNVAVLLRNYRITELVSLDLAYNDLKQLDQFPEGFSSIRSL 210
            ...||..:..|:.|:.::.:||.::::...|.  .:|||..:.|:.|.|:::.:....:.|:..|
Mouse   262 LMSLPESLSQCSKLSVLDLTHNSIHSLPSSLE--LLTELTEVGLSGNRLEKVPRLLCSWVSLHLL 324

  Fly   211 QLQSNELPSLPDNFFAVTHAR---------------------LETLNVSCNKLSTLPRYEQNNHA 254
            .|::..|..|.|:|..:.:.|                     ||.|.:..||:..||    .:.:
Mouse   325 YLRNTSLHGLRDSFKRLINLRFLDLSQNHIEHFPVQICALKNLEILALDDNKVRQLP----PSIS 385

  Fly   255 ALVNLSLAGNHLND----------------------------SIFEPLHNAAKLRVLHLAYNRIG 291
            .|.||.:.|...||                            |:.|.:.....|:.|::..||:.
Mouse   386 LLSNLKILGLTGNDLLSFPEEIFSLISLEKLYIGQDQGSKLSSLPENIKRLMNLKELYIENNRLE 450

  Fly   292 VLPAACVRNWPELEILVLSGNMLQQLPEEVATLGQLRVLRCCNNLLLCTPQ-LAKLAMLKVLDLS 355
            .|||: :...|.||:|....|:|:|||:.:.....||.|...:|||.|.|: |..|..||||.|.
Mouse   451 QLPAS-LGLMPNLEVLDCRHNLLKQLPDAICRTRNLRELLLEDNLLCCLPENLDHLVNLKVLTLM 514

  Fly   356 HNHLDRVNLLALVPSRNLKYLDLSGNLQLQVDEQQFKVCQSQSQRHWSLVDVSGNNRAALPTTKI 420
            :|.:                          ||...: ||...::..|.          .|...:|
Mouse   515 NNPM--------------------------VDPPIY-VCNQGNEAIWK----------HLKENRI 542

  Fly   421 RQVSAQRNQNKTSGPWTMGFAETPGSGDCRKLSVYQLRAANYGGS 465
            |::.|     .|...|..|.....|.|...:|    |:|...|.|
Mouse   543 RKMMA-----TTIQAWWRGIMVRKGYGSYEEL----LKARKKGKS 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhlppNP_001260558.1 leucine-rich repeat 91..110 CDD:275380 11/71 (15%)
LRR_8 109..169 CDD:290566 18/82 (22%)
leucine-rich repeat 111..135 CDD:275380 7/23 (30%)
leucine-rich repeat 136..158 CDD:275380 6/21 (29%)
leucine-rich repeat 159..183 CDD:275380 4/23 (17%)
leucine-rich repeat 184..209 CDD:275380 5/24 (21%)
LRR_8 205..266 CDD:290566 19/81 (23%)
leucine-rich repeat 210..230 CDD:275380 6/19 (32%)
leucine-rich repeat 232..255 CDD:275380 7/22 (32%)
LRR_RI <256..410 CDD:238064 45/182 (25%)
leucine-rich repeat 256..276 CDD:275380 8/47 (17%)
LRR_8 279..359 CDD:290566 32/80 (40%)
leucine-rich repeat 280..303 CDD:275380 7/22 (32%)
leucine-rich repeat 304..348 CDD:275380 18/44 (41%)
leucine-rich repeat 349..372 CDD:275380 6/22 (27%)
PP2Cc 461..655 CDD:294085 2/5 (40%)
Lrriq4XP_011248011.1 LRR_RI 48..309 CDD:393385 52/243 (21%)
leucine-rich repeat 89..111 CDD:275380 4/21 (19%)
leucine-rich repeat 112..135 CDD:275380 4/22 (18%)
leucine-rich repeat 183..205 CDD:275380 6/21 (29%)
leucine-rich repeat 206..228 CDD:275380 0/21 (0%)
LRR 228..521 CDD:227223 80/327 (24%)
leucine-rich repeat 229..251 CDD:275380 7/23 (30%)
leucine-rich repeat 252..274 CDD:275380 6/21 (29%)
leucine-rich repeat 275..297 CDD:275380 4/23 (17%)
leucine-rich repeat 298..320 CDD:275380 4/21 (19%)
leucine-rich repeat 321..343 CDD:275380 6/21 (29%)
leucine-rich repeat 344..366 CDD:275380 1/21 (5%)
leucine-rich repeat 367..389 CDD:275380 8/25 (32%)
leucine-rich repeat 390..438 CDD:275380 6/47 (13%)
leucine-rich repeat 413..436 CDD:275380 2/22 (9%)
leucine-rich repeat 439..461 CDD:275380 7/22 (32%)
leucine-rich repeat 462..484 CDD:275380 8/21 (38%)
leucine-rich repeat 485..507 CDD:275380 10/21 (48%)
IQ 543..563 CDD:197470 5/24 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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