DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Phlpp and shoc2

DIOPT Version :9

Sequence 1:NP_001260558.1 Gene:Phlpp / 35178 FlyBaseID:FBgn0032749 Length:954 Species:Drosophila melanogaster
Sequence 2:NP_001038251.1 Gene:shoc2 / 555476 ZFINID:ZDB-GENE-050208-523 Length:561 Species:Danio rerio


Alignment Length:571 Identity:132/571 - (23%)
Similarity:212/571 - (37%) Gaps:155/571 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LKATRKQADPYKSKLKVSASHSGPHPLPVEVTAAEEEQAATFGQTSPQKLSLKGSQLGGSILIGN 66
            |.:|.|:.:|..|..|.|::..    :..|:....||.:... ..|.:.:.|..|.      |..
Zfish    47 LDSTIKRPNPPPSTRKKSSNAE----VIKELNKCREENSMRL-DLSKRSIHLLPSS------IKE 100

  Fly    67 YNYLTQLEVCENEMEVL--DLSSLAQLETLKCSRNKLMEL---IINGTNLQTLVADHNYLHNIS- 125
            ...||:|.:..|:::.|  ::..|:.|.||..|.|.|..|   :.|...|:.|...||.|..|. 
Zfish   101 LTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPA 165

  Fly   126 ------------------TTNTHPVP--LKLQRIDISHNNFSELPNWVGACASLTAINASHNRLN 170
                              ||....:.  .||..:.|..|...:||..:|...:|..::.:||:|.
Zfish   166 VVYRVSSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLE 230

  Fly   171 NVAVLLRNYRITELVSLDLAYNDLKQLDQFPEGFSSIRSLQLQSNELPSLPDNFFAVTHARLETL 235
            ::...:.|  .|::.:|||.:|||..|.:.....:||..|.|:.|.|.::|.:.  .....||.|
Zfish   231 HLPKEIGN--CTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSL--AKCRELEEL 291

  Fly   236 NVSCNKLSTLPRYEQNNHAALVNLSLAGNHLND------SIFEPLHNAAKLRVLHLAYNRIGVLP 294
            |:..|.:|.||....::...|.:|:||.|....      |.|..:::      |::.:|||..:|
Zfish   292 NLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYS------LNMEHNRINKIP 350

  Fly   295 AACVR-----------------------NWPELEILVLSGNMLQQLPEEVATLGQLRVLRCCNNL 336
            .....                       .|..:..|.|:.|.|.::||::..|..|.:|...|||
Zfish   351 FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEMLTLSNNL 415

  Fly   337 LLCTPQ-LAKLAMLKVLDLSHNHLDRV-----------------NLLALVPS-----RNLKYLDL 378
            |...|. :..|..|:.|||..|.|:.:                 |.|..:|.     .||.||.|
Zfish   416 LKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTYLGL 480

  Fly   379 SGNLQLQVDEQQFKVCQSQSQRHWSLVDVSGNNRAALPTTKIRQVSAQRNQNKTSGPWTMGFAET 443
            ..|| ||...::....:       :|.|:..|:                |.|..|.|:.:..   
Zfish   481 GENL-LQHLPEEIGTLE-------NLEDLYLND----------------NPNLHSLPFELAL--- 518

  Fly   444 PGSGDCRKLSVYQLRAANYGGSDEALYGMFEALEGRGRAAQEMSHLVPDLM 494
                 |.|||:..:...                        .:|||.|.::
Zfish   519 -----CSKLSIMSIENC------------------------PLSHLPPQIV 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhlppNP_001260558.1 leucine-rich repeat 91..110 CDD:275380 8/21 (38%)
LRR_8 109..169 CDD:290566 18/80 (23%)
leucine-rich repeat 111..135 CDD:275380 8/44 (18%)
leucine-rich repeat 136..158 CDD:275380 6/21 (29%)
leucine-rich repeat 159..183 CDD:275380 5/23 (22%)
leucine-rich repeat 184..209 CDD:275380 9/24 (38%)
LRR_8 205..266 CDD:290566 20/60 (33%)
leucine-rich repeat 210..230 CDD:275380 5/19 (26%)
leucine-rich repeat 232..255 CDD:275380 8/22 (36%)
LRR_RI <256..410 CDD:238064 48/205 (23%)
leucine-rich repeat 256..276 CDD:275380 7/25 (28%)
LRR_8 279..359 CDD:290566 26/103 (25%)
leucine-rich repeat 280..303 CDD:275380 6/45 (13%)
leucine-rich repeat 304..348 CDD:275380 15/44 (34%)
leucine-rich repeat 349..372 CDD:275380 9/44 (20%)
PP2Cc 461..655 CDD:294085 4/34 (12%)
shoc2NP_001038251.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..67 7/19 (37%)
LRR 1 80..101 4/27 (15%)
leucine-rich repeat 83..103 CDD:275380 4/26 (15%)
LRR_8 102..160 CDD:290566 18/57 (32%)
LRR 2 103..124 5/20 (25%)
leucine-rich repeat 104..126 CDD:275380 6/21 (29%)
LRR_RI <124..229 CDD:238064 27/104 (26%)
LRR 3 126..148 8/21 (38%)
leucine-rich repeat 127..149 CDD:275380 8/21 (38%)
LRR 4 149..170 6/20 (30%)
leucine-rich repeat 150..172 CDD:275380 6/21 (29%)
LRR_8 171..229 CDD:290566 12/57 (21%)
LRR 5 172..193 2/20 (10%)
leucine-rich repeat 173..195 CDD:275380 2/21 (10%)
LRR 6 195..216 7/20 (35%)
leucine-rich repeat 196..218 CDD:275380 6/21 (29%)
LRR 7 218..239 5/22 (23%)
leucine-rich repeat 219..241 CDD:275380 5/23 (22%)
LRR 8 241..262 7/20 (35%)
leucine-rich repeat 242..264 CDD:275380 7/21 (33%)
LRR 9 264..286 7/23 (30%)
leucine-rich repeat 265..311 CDD:275380 14/47 (30%)
LRR_RI 268..483 CDD:238064 55/222 (25%)
LRR 10 287..308 8/20 (40%)
LRR 11 311..332 5/20 (25%)
leucine-rich repeat 312..359 CDD:275380 12/52 (23%)
leucine-rich repeat 316..335 CDD:275380 5/18 (28%)
LRR 12 335..356 5/26 (19%)
LRR 13 359..379 0/19 (0%)
leucine-rich repeat 360..382 CDD:275380 1/21 (5%)
LRR_8 381..439 CDD:290566 20/57 (35%)
LRR 14 382..403 6/20 (30%)
leucine-rich repeat 383..405 CDD:275380 7/21 (33%)
LRR 15 405..427 7/21 (33%)
leucine-rich repeat 406..428 CDD:275380 8/21 (38%)
LRR_8 427..485 CDD:290566 16/58 (28%)
LRR 16 428..449 6/20 (30%)
leucine-rich repeat 429..451 CDD:275380 6/21 (29%)
LRR 17 451..473 3/21 (14%)
leucine-rich repeat 452..474 CDD:275380 3/21 (14%)
LRR 18 474..495 9/21 (43%)
leucine-rich repeat 475..498 CDD:275380 8/30 (27%)
LRR 19 497..519 7/45 (16%)
LRR 20 521..542 7/44 (16%)
leucine-rich repeat 522..542 CDD:275380 6/43 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R9772
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

Return to query results.
Submit another query.