DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phlpp and lrrc40

DIOPT Version :9

Sequence 1:NP_001260558.1 Gene:Phlpp / 35178 FlyBaseID:FBgn0032749 Length:954 Species:Drosophila melanogaster
Sequence 2:NP_001011310.1 Gene:lrrc40 / 496765 XenbaseID:XB-GENE-968689 Length:605 Species:Xenopus tropicalis


Alignment Length:607 Identity:147/607 - (24%)
Similarity:231/607 - (38%) Gaps:165/607 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKATRKQADPYKSKLKVSASHSGPHPLPVEV------TAAEEEQAATFGQTSPQKLSLKGSQLG 59
            ::||.||     ..:|.:||  .|...:||.|      |..|..|...|               |
 Frog    31 LIKAARK-----SGQLNLSA--RGLTDVPVSVWRINVDTPPEAHQNVDF---------------G 73

  Fly    60 GSILIGNYNYLTQLEVCENEMEVL--DLSSLAQLETLKCSRNKLMEL---IINGTNLQTLVADHN 119
            ||........||:|.:..|::::|  |:|.|..|..|....|:::.|   |...||||.|...||
 Frog    74 GSDRWWEQTDLTKLILASNKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHN 138

  Fly   120 YLHNISTTNTHPVPLKLQRID------ISHNNFSELPNWVGACASLTAINASHNRLNNVAVLLRN 178
            .:..:        |.:||.:.      :.||...|||:.:|..:.|..::.|:|.|.:::..:. 
 Frog   139 KIKQL--------PKELQHLQNLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVG- 194

  Fly   179 YRITELVSLDLAYNDLKQLDQFPEGFSSIRSLQLQSNELPSLPDNFFAVTHARLETLNVSCNKLS 243
             ::|.||..:|:.|.|..|........:::.|...||.|.::|.:...:  ..||.|.:..|||:
 Frog   195 -QLTGLVKFNLSSNKLTALPTEIGKMKNLKQLDCTSNLLENVPASVAGM--ESLEQLYLRQNKLT 256

  Fly   244 TLPRYEQNNHAALVNLSLAGNHLNDSIFEPLHNAAKLRVLHLAYNRIGVLPAACVRNWPELEILV 308
            .||.                          |....||:.||:..|:|..|....::|...|.:|.
 Frog   257 YLPE--------------------------LPFLTKLKELHVGNNQIQTLGPEHLQNLSSLSVLE 295

  Fly   309 LSGNMLQQLPEEVATLGQLRVLRCCNN---LLLCTPQLAKLAMLKVLDLSHNHLD--RVNLLALV 368
            |..|.|:.||||::.|..|..|...||   .|.||  |..|..||.|.|..|.|.  |.::|...
 Frog   296 LRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPCT--LGSLPNLKSLQLEGNPLRGIRRDILNKG 358

  Fly   369 PSRNLKYLDLSGNLQL-----QVDE-----------------------QQFKVCQSQSQRHWSLV 405
            ....|||  |.|.:|:     |.||                       :..:.|:.|:    ||:
 Frog   359 TQELLKY--LKGRVQVPDVKTQEDENSTATAMTLPSESVVNTHAIVTLKTLEYCEKQA----SLI 417

  Fly   406 DVSGNNRAALPTTKIRQVSAQRNQNKTSGPWTMGFAETPGSGDCRKLSVYQLRAANYGGSDEALY 470
            ..:..|  |..::.|..|:..:||          ..|.|......|.||..:   |.|      :
 Frog   418 PEAVFN--ATGSSFITTVNFSKNQ----------LTEVPARIVEMKDSVCDV---NLG------F 461

  Fly   471 GMFEALEGRGRAAQEMSHL---------VPDLMKQEQMVK-DSAVRDYMKF-------------- 511
            ....::........:::|:         :|..|  |.|.: .|.:..:.:|              
 Frog   462 NKISSISLNLCMLLKLTHIDMRNNVLTSLPSEM--EAMTRLQSVILSFNRFKHFPDVLYRIPTLE 524

  Fly   512 TLLAAQQQCGSVRSAALFHLTR 533
            |:|.:..|.||:....|..:|:
 Frog   525 TILISSNQIGSIDPTQLIKMTK 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhlppNP_001260558.1 leucine-rich repeat 91..110 CDD:275380 5/21 (24%)
LRR_8 109..169 CDD:290566 19/65 (29%)
leucine-rich repeat 111..135 CDD:275380 6/23 (26%)
leucine-rich repeat 136..158 CDD:275380 8/27 (30%)
leucine-rich repeat 159..183 CDD:275380 4/23 (17%)
leucine-rich repeat 184..209 CDD:275380 6/24 (25%)
LRR_8 205..266 CDD:290566 13/60 (22%)
leucine-rich repeat 210..230 CDD:275380 5/19 (26%)
leucine-rich repeat 232..255 CDD:275380 8/22 (36%)
LRR_RI <256..410 CDD:238064 49/186 (26%)
leucine-rich repeat 256..276 CDD:275380 1/19 (5%)
LRR_8 279..359 CDD:290566 32/82 (39%)
leucine-rich repeat 280..303 CDD:275380 7/22 (32%)
leucine-rich repeat 304..348 CDD:275380 19/46 (41%)
leucine-rich repeat 349..372 CDD:275380 8/24 (33%)
PP2Cc 461..655 CDD:294085 16/97 (16%)
lrrc40NP_001011310.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..26
LRR <82..348 CDD:227223 86/305 (28%)
LRR 1 83..104 7/20 (35%)
leucine-rich repeat 84..106 CDD:275380 8/21 (38%)
LRR 2 106..127 5/20 (25%)
leucine-rich repeat 107..129 CDD:275380 5/21 (24%)
LRR 3 129..151 9/29 (31%)
leucine-rich repeat 130..152 CDD:275380 8/29 (28%)
LRR 4 152..173 6/20 (30%)
leucine-rich repeat 153..175 CDD:275380 6/21 (29%)
LRR 5 175..196 4/22 (18%)
leucine-rich repeat 176..198 CDD:275380 4/23 (17%)
LRR 6 198..219 6/20 (30%)
leucine-rich repeat 199..221 CDD:275380 6/21 (29%)
LRR 7 221..242 5/20 (25%)
leucine-rich repeat 222..244 CDD:275380 5/23 (22%)
internalin_A 238..>583 CDD:380193 84/368 (23%)
LRR 8 244..265 9/46 (20%)
leucine-rich repeat 245..266 CDD:275380 9/46 (20%)
LRR 9 266..287 7/20 (35%)
leucine-rich repeat 267..290 CDD:275380 7/22 (32%)
LRR 10 290..311 9/20 (45%)
leucine-rich repeat 291..313 CDD:275380 10/21 (48%)
LRR 11 313..335 8/23 (35%)
leucine-rich repeat 314..336 CDD:275380 9/23 (39%)
LRR 12 336..357 8/20 (40%)
leucine-rich repeat 337..355 CDD:275380 7/17 (41%)
leucine-rich repeat 363..476 CDD:275380 26/139 (19%)
LRR 13 429..450 6/30 (20%)
LRR 14 453..475 4/30 (13%)
LRR 15 476..497 4/22 (18%)
leucine-rich repeat 477..522 CDD:275380 7/46 (15%)
LRR 16 499..520 2/20 (10%)
leucine-rich repeat 500..513 CDD:275380 2/12 (17%)
LRR 17 522..543 6/20 (30%)
leucine-rich repeat 523..546 CDD:275380 6/22 (27%)
LRR 18 546..567 0/1 (0%)
leucine-rich repeat 547..569 CDD:275380 147/607 (24%)
LRR 19 569..590
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR45752
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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