DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Phlpp and gcy-34

DIOPT Version :9

Sequence 1:NP_001260558.1 Gene:Phlpp / 35178 FlyBaseID:FBgn0032749 Length:954 Species:Drosophila melanogaster
Sequence 2:NP_506319.1 Gene:gcy-34 / 191656 WormBaseID:WBGene00001554 Length:686 Species:Caenorhabditis elegans


Alignment Length:456 Identity:79/456 - (17%)
Similarity:160/456 - (35%) Gaps:103/456 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 SLPDNFFAVTHARL-----ETLNVSCNKL-----STLPRYEQNNHAALVNLSLAGNHLNDSIFEP 273
            :||.:|......||     |..|...|:|     ..|..:|.|.....::.....|.:| ::|..
 Worm   234 ALPYHFVLDESCRLVQCGDELYNHIPNELLQPGTPILRIFEINRPQIPLDFENICNFIN-AVFVL 297

  Fly   274 LHNAAKLRVLHLAYNRIGVLPAACVRNWPELEILVLSGNMLQQLPEEVAT-----------LGQL 327
            ....:.||..|:         .|..:...|.|:        :.:.|||.:           .||:
 Worm   298 QVKTSPLRKKHM---------NAMTKEEREQEV--------EAMEEEVESNELTQGCHLKLKGQM 345

  Fly   328 RVLRCCNNLL-LCTPQLAKLAMLKVLDLSHNHL---DRVNLLALVPSRNLKYLDLSGNLQLQVDE 388
            .:|....::: ||:|.:..:..|....:....:   |....|.|:..:.|.  |:..||||:.:.
 Worm   346 MMLSTKKHIIYLCSPYVTSINELMQFGMRLTAMPLHDATRDLILLNQQRLS--DVEVNLQLEANN 408

  Fly   389 QQFKV----CQSQSQRHWSLVDVSGNNRAALPTTKIRQVSAQRNQNKTSGPWTMGFAETPGSGD- 448
            :|.:.    .:.:.|:..|::      :..||....:|:.:..:........|:.|.:.|.... 
 Worm   409 EQLETMTHELEVERQKTDSIL------KDMLPRKIAKQLLSGEHLEPCEYEATVMFCDLPAFQQI 467

  Fly   449 ---CRKLSVYQLRAANYGGSDE--ALYGMFE---------ALEG----RGRAAQEMSHLVPDLMK 495
               |:..::.:|....:...|.  .|.|:::         .:.|    ....|:.|.|:...:|.
 Worm   468 IPVCQPKNIVKLLNEVFFKLDRIVVLRGVYKVETVSDSYMTVSGIPDYTSEHAENMCHVALGMMW 532

  Fly   496 QEQMVKD------------------------SAVRDYMKF----TLLAAQQQCGSVRSAALFHLT 532
            :.:.|.|                        :.:..|..|    ||.:..:..|..........|
 Worm   533 EARSVMDPVNKTPFLLRIGLHSGTIIAGVVGTKMPRYCLFGETVTLASQMESLGVAGKIQCSSWT 597

  Fly   533 RTRAPSKVRPLKSKRYVLRMASTGGLDAYLIRRTSQLRLTKPDVIQKD-QIHSMPDPHVLELILS 596
            .::|....|...|.|..:.:...|.::.|.:.|:.:..:.:....::| .::|:.....||:.:.
 Worm   598 YSKAMETGRFEFSPRGRINVKGRGDVETYFLMRSLKKSIWEITDHERDVNVNSIEGYEELEIFIE 662

  Fly   597 N 597
            |
 Worm   663 N 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhlppNP_001260558.1 leucine-rich repeat 91..110 CDD:275380
LRR_8 109..169 CDD:290566
leucine-rich repeat 111..135 CDD:275380
leucine-rich repeat 136..158 CDD:275380
leucine-rich repeat 159..183 CDD:275380
leucine-rich repeat 184..209 CDD:275380
LRR_8 205..266 CDD:290566 13/56 (23%)
leucine-rich repeat 210..230 CDD:275380 3/10 (30%)
leucine-rich repeat 232..255 CDD:275380 8/32 (25%)
LRR_RI <256..410 CDD:238064 31/172 (18%)
leucine-rich repeat 256..276 CDD:275380 3/19 (16%)
LRR_8 279..359 CDD:290566 16/91 (18%)
leucine-rich repeat 280..303 CDD:275380 4/22 (18%)
leucine-rich repeat 304..348 CDD:275380 10/55 (18%)
leucine-rich repeat 349..372 CDD:275380 4/25 (16%)
PP2Cc 461..655 CDD:294085 28/181 (15%)
gcy-34NP_506319.1 HNOB 3..167 CDD:285002
HNOBA 224..441 CDD:285003 45/232 (19%)
CYCc 421..609 CDD:214485 28/193 (15%)
Guanylate_cyc 453..629 CDD:278633 27/175 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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