DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Phlpp and soc-2

DIOPT Version :9

Sequence 1:NP_001260558.1 Gene:Phlpp / 35178 FlyBaseID:FBgn0032749 Length:954 Species:Drosophila melanogaster
Sequence 2:NP_001293758.1 Gene:soc-2 / 177286 WormBaseID:WBGene00004929 Length:631 Species:Caenorhabditis elegans


Alignment Length:458 Identity:121/458 - (26%)
Similarity:190/458 - (41%) Gaps:79/458 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKATRKQADPYKSKLKVSASHSGPHPLPV-EVTAAEEEQAATFGQTSPQKLSLKGSQLGGSILI 64
            :||...|..:....:|.:|:......|.|: |:|...|    .|  ....||:...:::|..:  
 Worm   135 LLKEFHKCKEAQDQRLDLSSIEITSIPSPIKELTQLTE----LF--LYKNKLTCLPTEIGQLV-- 191

  Fly    65 GNYNYLTQLEVCENEMEVL--DLSSLAQLETLKCSRNKLME---LIINGTNLQTL-------VAD 117
                .|.:|.:.||.:..|  .|:||..||||....|||.|   :|....:|:||       ||.
 Worm   192 ----NLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAV 252

  Fly   118 HNYLHNISTTNTHPVPLKLQRIDISHNNFSELPNWVGACASLTAINASHNRLNNVAVLLRNYRIT 182
            ...:.|:|         ||:.:|:..|...|||:.:|...||.....|:|.|..|...:.:..  
 Worm   253 DEQIGNLS---------KLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCH-- 306

  Fly   183 ELVSLDLAYNDLKQLDQ--------------------FPEGFSSIRSLQ---LQSNELPSLPDNF 224
            .|..|||.:|||.:|..                    .|....|.:.|:   ::||.|..||.|.
 Worm   307 SLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNL 371

  Fly   225 FAVTHARLETLNVSCNKLSTLPRYEQNNHAALVNLSLAGNHLNDSIFEPLHNAAKLRVLHLAYNR 289
            ..:. .::.|:|:|.|:|:..|........:.|.:::..|.::.........|.:|..|:|..|.
 Worm   372 LTML-PKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENE 435

  Fly   290 IGVLPAACVRNWPELEILVLSGNMLQQLPEEVATLGQLRVLRCCNNLLLCTP-QLAKLAMLKVLD 353
            :..||.. :.:|..:..|.||.|.|:.|||::..|..|.:|...||.|...| |:..|..|:.||
 Worm   436 LVSLPLD-MGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELD 499

  Fly   354 LSHNHLDRVNLLALVPS-----RNLKYLDLSGNLQLQVDEQQFKVCQSQSQRHWSLVDVSGNNRA 413
            |..|.|:      .||:     ::|..|.:..|..|.:......:|..|..|      :..||..
 Worm   500 LEENELE------TVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLR------LGENNLT 552

  Fly   414 ALP 416
            |:|
 Worm   553 AIP 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhlppNP_001260558.1 leucine-rich repeat 91..110 CDD:275380 9/21 (43%)
LRR_8 109..169 CDD:290566 19/66 (29%)
leucine-rich repeat 111..135 CDD:275380 7/30 (23%)
leucine-rich repeat 136..158 CDD:275380 7/21 (33%)
leucine-rich repeat 159..183 CDD:275380 5/23 (22%)
leucine-rich repeat 184..209 CDD:275380 10/44 (23%)
LRR_8 205..266 CDD:290566 16/63 (25%)
leucine-rich repeat 210..230 CDD:275380 7/22 (32%)
leucine-rich repeat 232..255 CDD:275380 6/22 (27%)
LRR_RI <256..410 CDD:238064 42/159 (26%)
leucine-rich repeat 256..276 CDD:275380 2/19 (11%)
LRR_8 279..359 CDD:290566 29/80 (36%)
leucine-rich repeat 280..303 CDD:275380 7/22 (32%)
leucine-rich repeat 304..348 CDD:275380 17/44 (39%)
leucine-rich repeat 349..372 CDD:275380 8/27 (30%)
PP2Cc 461..655 CDD:294085
soc-2NP_001293758.1 leucine-rich repeat 148..169 CDD:275380 5/20 (25%)
leucine-rich repeat 170..192 CDD:275380 5/33 (15%)
LRR_RI <192..274 CDD:238064 28/90 (31%)
LRR_8 192..249 CDD:290566 20/56 (36%)
leucine-rich repeat 193..215 CDD:275380 8/21 (38%)
leucine-rich repeat 216..238 CDD:275380 9/21 (43%)
LRR_8 238..318 CDD:290566 26/90 (29%)
leucine-rich repeat 239..261 CDD:275380 7/30 (23%)
leucine-rich repeat 262..284 CDD:275380 7/21 (33%)
leucine-rich repeat 285..307 CDD:275380 5/23 (22%)
leucine-rich repeat 308..330 CDD:275380 8/21 (38%)
LRR_RI 327..553 CDD:238064 59/239 (25%)
leucine-rich repeat 331..353 CDD:275380 2/21 (10%)
leucine-rich repeat 354..375 CDD:275380 7/20 (35%)
leucine-rich repeat 402..425 CDD:275380 3/22 (14%)
leucine-rich repeat 449..471 CDD:275380 9/21 (43%)
leucine-rich repeat 472..517 CDD:275380 16/50 (32%)
LRR_8 517..572 CDD:290566 11/45 (24%)
leucine-rich repeat 541..563 CDD:275380 6/21 (29%)
leucine-rich repeat 588..611 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R9772
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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