DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phlpp and sma-10

DIOPT Version :9

Sequence 1:NP_001260558.1 Gene:Phlpp / 35178 FlyBaseID:FBgn0032749 Length:954 Species:Drosophila melanogaster
Sequence 2:NP_499896.1 Gene:sma-10 / 176849 WormBaseID:WBGene00020649 Length:881 Species:Caenorhabditis elegans


Alignment Length:868 Identity:186/868 - (21%)
Similarity:311/868 - (35%) Gaps:255/868 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 LEVCENEMEVLDLSSLAQ---LETLKCSRNKL----MELIINGTNLQTLVADHNYLHNISTTNTH 130
            |.:.:||:|.:|.|.|..   |:||..|.|.:    .|...|..||:.|....|.|..| ...:|
 Worm    57 LLLSDNEIESIDKSRLKGFYFLQTLDISNNIIRHIDFEFFYNLPNLKILNIRKNRLARI-PRGSH 120

  Fly   131 PVPLKLQRIDISHNNFSELPN-WVGACASLTAINASHNRLNNVAVLLRNYRITELVSLDLAYNDL 194
            .:. .|:::|:..|..|.:.: .:...|::.:::.|.|.::.:.....:.:: .:..||||.|.:
 Worm   121 ELG-HLEKLDLRSNLISTVTSEELSYLAAVRSVDLSRNLISYLPKPTTSAKV-NIEKLDLASNSI 183

  Fly   195 KQL--DQFPEGFSSIRSLQLQSNELPSLPDNFFAVTHAR-LETLNVSCNKLSTLPRYEQNNHAAL 256
            ..:  |.| ..|:::.:|:|..|.:.:|  |.|:.:..| ||:|:::.|.:..:.....|...:|
 Worm   184 TDIGTDHF-SSFNTLVTLKLARNHITTL--NQFSFSRLRKLESLDLTRNMIREVRFLAFNQLPSL 245

  Fly   257 VNLSLAGN---HLNDSIFEP---------------------LHNAAKLRVLHLAYNRIGVLPAAC 297
            .|:|||.|   .|:|.:|..                     :.....|.||.|:||:|.....:.
 Worm   246 QNVSLARNDVYRLDDGMFYACEGLKHLNLSTNRVQAVTEGWMFGLTSLEVLDLSYNQIQSFHISS 310

  Fly   298 VRNWPELEILVLSGNMLQQLPEEVATLGQLRVLRCCNNLLLCTPQLAKLAMLKVLDLSHNHLDRV 362
            ..:.|:|:.|.|..|.:|.||.     |..||||                .|:.|.||.|.:|.:
 Worm   311 WSHTPKLKWLSLHSNRIQSLPS-----GSFRVLR----------------QLEELILSANSIDSL 354

  Fly   363 NLLALVPSRNLKYLDLSGNLQLQVDEQQFKVCQSQSQRHWSLVDVSGNNRAALPTTKIRQVSAQR 427
            :..|||...:|..||||.|        ...||....              |.|..|.:..:.:.|
 Worm   355 HKFALVGMSSLHKLDLSSN--------TLAVCVEDG--------------AVLYNTSMPFLRSLR 397

  Fly   428 NQNKTSGPWTMGFAETPGSGDCRKLSVYQLRAANYGGSDEALYGMFEALEGRGRAAQEMSHLVPD 492
            ..|                   .:|.|...||          :..|.|||               
 Worm   398 FTN-------------------NQLRVIPKRA----------FERFPALE--------------- 418

  Fly   493 LMKQEQMVKDSAVRDYMKFTLLAAQQQCGSVRSAALFHLTRTRAPSKVRPLKSKRYVLRMAS--- 554
                |..:.|:.:                     |..|      |....||:.||.|:..:|   
 Worm   419 ----ELDLTDNPI---------------------ATIH------PEAFEPLELKRLVMNSSSILC 452

  Fly   555 ---TGGLDAYLIRRTSQLRLTKPDVIQKDQIHSMPDP---------HVLELILSNDDEYL----- 602
               ...|.:::.|    |:|.|..:|.|   .|.|.|         ....|...||....     
 Worm   453 DCQISWLASWIYR----LKLDKSSIIAK---CSYPPPLADLYVVAIDTANLTCHNDSPRAKIVRQ 510

  Fly   603 -----------------VVGNAQL---WSVMD----------------IDR-AAREIRKEENSLL 630
                             |.|.:.|   |.||:                |:| |......:|..|.
 Worm   511 PVEVSTLIGEKARFTCNVYGASPLSIEWRVMENGQPRVLVQDSATFLSINRTAVVNGTFDERELA 575

  Fly   631 AAKRLVDIAQSFAAAESLSVIVVRFRHLGTDVD-HLIRELKQSVRKKPQPVSLPLSSGSVCKRTC 694
            ||:.|:|   :.|..::.....|.....|:|.. |:..::.|:.:....|..:||..|...|..|
 Worm   576 AAELLLD---NVAMTDNSEYQCVARNRFGSDFSTHVKLQVYQAPKFTYTPEDMPLLVGQTAKFLC 637

  Fly   695 CDRSNACRHR---AIEQEPLAGRSSPSGQSDRDLLAKDKDDEFVLAHARVLQEEQ------QLEM 750
            . .:...|..   |.||.|.     |:.::.|..:..:.|..:::   .|.:|:|      ...:
 Worm   638 A-ATGTPRPEIKWAFEQIPF-----PAAEARRLYVTPNDDHIYIM---NVTKEDQGAYTCHATNV 693

  Fly   751 LDETESVSESVLSEEQFKCWE------YMLEQNTQLLFDKELNTISKSFTKQRTVPNAIMAATVL 809
            ..:|::.:..::.|..|...|      .::::...|..|...:.||   ::||.|........:.
 Worm   694 AGQTQASANLIVFENFFHYPESPDLSPMLIKKRDALKIDCSCDLIS---SRQRMVWKRQQQVILF 755

  Fly   810 PERNDFTSN-LMRTVTNKFISTS 831
            .::..|:.| .:.|:|....|.|
 Worm   756 LKKAKFSDNDQILTLTQTTFSDS 778

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhlppNP_001260558.1 leucine-rich repeat 91..110 CDD:275380 7/22 (32%)
LRR_8 109..169 CDD:290566 14/60 (23%)
leucine-rich repeat 111..135 CDD:275380 6/23 (26%)
leucine-rich repeat 136..158 CDD:275380 4/22 (18%)
leucine-rich repeat 159..183 CDD:275380 2/23 (9%)
leucine-rich repeat 184..209 CDD:275380 8/26 (31%)
LRR_8 205..266 CDD:290566 18/64 (28%)
leucine-rich repeat 210..230 CDD:275380 6/19 (32%)
leucine-rich repeat 232..255 CDD:275380 5/22 (23%)
LRR_RI <256..410 CDD:238064 46/177 (26%)
leucine-rich repeat 256..276 CDD:275380 9/43 (21%)
LRR_8 279..359 CDD:290566 25/79 (32%)
leucine-rich repeat 280..303 CDD:275380 7/22 (32%)
leucine-rich repeat 304..348 CDD:275380 12/43 (28%)
leucine-rich repeat 349..372 CDD:275380 9/22 (41%)
PP2Cc 461..655 CDD:294085 45/250 (18%)
sma-10NP_499896.1 LRRNT 29..54 CDD:214470
leucine-rich repeat 55..77 CDD:275380 7/19 (37%)
LRR_8 78..135 CDD:290566 17/58 (29%)
LRR_4 78..116 CDD:289563 13/38 (34%)
leucine-rich repeat 78..101 CDD:275380 7/22 (32%)
LRR_RI 100..303 CDD:238064 49/208 (24%)
leucine-rich repeat 102..124 CDD:275380 6/23 (26%)
leucine-rich repeat 125..148 CDD:275380 4/22 (18%)
leucine-rich repeat 149..172 CDD:275380 2/23 (9%)
LRR_8 172..231 CDD:290566 19/61 (31%)
leucine-rich repeat 173..196 CDD:275380 8/23 (35%)
leucine-rich repeat 197..220 CDD:275380 6/24 (25%)
leucine-rich repeat 221..244 CDD:275380 5/22 (23%)
LRR_8 243..303 CDD:290566 15/59 (25%)
leucine-rich repeat 245..268 CDD:275380 9/22 (41%)
LRR_RI 269..453 CDD:238064 61/301 (20%)
leucine-rich repeat 269..292 CDD:275380 0/22 (0%)
leucine-rich repeat 293..316 CDD:275380 7/22 (32%)
LRR_8 315..373 CDD:290566 27/78 (35%)
leucine-rich repeat 317..340 CDD:275380 12/43 (28%)
leucine-rich repeat 341..364 CDD:275380 9/22 (41%)
leucine-rich repeat 365..392 CDD:275380 11/48 (23%)
LRR_8 393..450 CDD:290566 20/131 (15%)
leucine-rich repeat 393..416 CDD:275380 7/51 (14%)
leucine-rich repeat 417..438 CDD:275380 7/66 (11%)
I-set 506..612 CDD:254352 20/108 (19%)
Ig 522..606 CDD:143165 19/86 (22%)
I-set 616..705 CDD:254352 18/97 (19%)
Ig 633..705 CDD:299845 14/80 (18%)
Ig 716..786 CDD:299845 13/66 (20%)
IG 719..788 CDD:214652 13/63 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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