DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phlpp and gc2

DIOPT Version :9

Sequence 1:NP_001260558.1 Gene:Phlpp / 35178 FlyBaseID:FBgn0032749 Length:954 Species:Drosophila melanogaster
Sequence 2:XP_021333059.1 Gene:gc2 / 140425 ZFINID:ZDB-GENE-011128-8 Length:1120 Species:Danio rerio


Alignment Length:563 Identity:95/563 - (16%)
Similarity:170/563 - (30%) Gaps:199/563 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 RVNLLALVPSRNLKYLDLS---------GNLQLQVDEQQFKVCQSQSQRHWSLVDVSGNNRAALP 416
            ::|.:.||...|...|.|:         .|.:|.||:.:      .|....|:     :.|:.:.
Zfish   498 KINKIRLVRGPNKILLTLNDVTFINPSLSNKKLSVDDSK------ASDTRMSI-----SERSLVS 551

  Fly   417 TTKIRQVSAQRNQNKT--SGPWTM-------GFAE-TPGSGDCRKLSVYQLRAANYGG-----SD 466
            ....:..:...|.|..  .|.|..       .|.. ||.:.|..:| :..||..|...     .|
Zfish   552 PMSSQSPATYENSNVAIYEGDWAWMKRLPYGTFRSITPNTSDVFEL-MKDLRHENINPFLGFFHD 615

  Fly   467 EALYGMFEALEGRGRAAQEMSHLVPDLMKQEQMVKDSAVRDYMK-FTLLAAQQQCGSVRSAALFH 530
            ..::.:......|| :.:::  ||.|.:|.:.|.|.|.:.|.:| ...|..:..|..        
Zfish   616 CGVFAIVTEFCSRG-SLEDL--LVNDDVKLDWMFKSSLILDLIKGMKYLHHRNVCHG-------- 669

  Fly   531 LTRTRAPSKVRPLKSK------RYVLRMASTGGLDA-------YLIRRTSQLRLTKPDVIQKDQI 582
                       .|||:      |:||::...|..:.       |:......|..|.|::::    
Zfish   670 -----------RLKSRNCVVDGRFVLKITDYGYNEVLESQRFPYIEPPAEDLLWTAPEILR---- 719

  Fly   583 HSMPDPHVLELILSNDDEYLVVGNAQLWSVMDIDRAAREIRKEENSLLAAKRLVDIAQSFAAAES 647
            .|.|..|...           .|:...:|::                                  
Zfish   720 GSYPGLHGTH-----------SGDVYSFSII---------------------------------- 739

  Fly   648 LSVIVVR---FRHLGTDVDHLIRELKQSVRKKPQPVSLPLSSGSVCKRTCCDRSNACRHRAIEQE 709
            :..:|:|   |..|....|.:::::     :||.|:..|:.|.......|......|.:...|:.
Zfish   740 MQEVVMRGPPFCMLENTFDEIVQKV-----RKPPPMCRPIVSPDHAPMECIQLMKQCWNEQPEKR 799

  Fly   710 PLAGRSSPSGQSDRDLLAKDKDDEFVLAHARVLQEEQQLEMLDETESVSESVLSEEQFKCWEYML 774
            |.........::    :.|.|....:         :..|.||::..|..|           |.:.
Zfish   800 PTFDEIFDQFKN----VNKGKKTNII---------DSMLRMLEQYSSNLE-----------ELIR 840

  Fly   775 EQNTQLLFDKELNTISKSFTKQRTVPNAIMAATVLPERNDFTSNLMRTVTNKFISTSTPQLPQPI 839
            |:..:|..:|:                                     .|.|.:   |..||..:
Zfish   841 ERTEELEIEKQ-------------------------------------KTEKLL---TQMLPPSV 865

  Fly   840 TTSVPLGSYHQVKQAPPGHFGSALSFQQAHSYGYNLFDAKPRP 882
            ..::.||:     ...|.||.| :|...:...|:....|...|
Zfish   866 AEALKLGT-----TVEPEHFES-VSLYFSDIVGFTTISANSEP 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhlppNP_001260558.1 leucine-rich repeat 91..110 CDD:275380
LRR_8 109..169 CDD:290566
leucine-rich repeat 111..135 CDD:275380
leucine-rich repeat 136..158 CDD:275380
leucine-rich repeat 159..183 CDD:275380
leucine-rich repeat 184..209 CDD:275380
LRR_8 205..266 CDD:290566
leucine-rich repeat 210..230 CDD:275380
leucine-rich repeat 232..255 CDD:275380
LRR_RI <256..410 CDD:238064 12/57 (21%)
leucine-rich repeat 256..276 CDD:275380
LRR_8 279..359 CDD:290566
leucine-rich repeat 280..303 CDD:275380
leucine-rich repeat 304..348 CDD:275380
leucine-rich repeat 349..372 CDD:275380 3/10 (30%)
PP2Cc 461..655 CDD:294085 33/215 (15%)
gc2XP_021333059.1 PBP1_sensory_GC_DEF_like 59..440 CDD:107366
PK_GC-2D 551..815 CDD:270945 56/344 (16%)
HNOBA <824..869 CDD:311573 14/95 (15%)
CYCc 848..1040 CDD:214485 16/101 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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