DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phlpp and lrfn1.1

DIOPT Version :9

Sequence 1:NP_001260558.1 Gene:Phlpp / 35178 FlyBaseID:FBgn0032749 Length:954 Species:Drosophila melanogaster
Sequence 2:XP_002940407.1 Gene:lrfn1.1 / 100487064 XenbaseID:XB-GENE-6045969 Length:742 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PhlppNP_001260558.1 leucine-rich repeat 91..110 CDD:275380
LRR_8 109..169 CDD:290566
leucine-rich repeat 111..135 CDD:275380
leucine-rich repeat 136..158 CDD:275380
leucine-rich repeat 159..183 CDD:275380
leucine-rich repeat 184..209 CDD:275380
LRR_8 205..266 CDD:290566
leucine-rich repeat 210..230 CDD:275380
leucine-rich repeat 232..255 CDD:275380
LRR_RI <256..410 CDD:238064
leucine-rich repeat 256..276 CDD:275380
LRR_8 279..359 CDD:290566
leucine-rich repeat 280..303 CDD:275380
leucine-rich repeat 304..348 CDD:275380
leucine-rich repeat 349..372 CDD:275380
PP2Cc 461..655 CDD:294085
lrfn1.1XP_002940407.1 leucine-rich repeat 55..78 CDD:275380
PPP1R42 58..208 CDD:411060
leucine-rich repeat 79..102 CDD:275380
leucine-rich repeat 103..126 CDD:275380
leucine-rich repeat 127..151 CDD:275380
leucine-rich repeat 152..175 CDD:275380
leucine-rich repeat 176..199 CDD:275380
leucine-rich repeat 200..218 CDD:275380
LRRCT 243..288 CDD:214507
Ig 290..378 CDD:416386
Ig strand A 290..293 CDD:409353
Ig strand A' 298..301 CDD:409353
Ig strand B 307..315 CDD:409353
Ig strand C 321..326 CDD:409353
Ig strand C' 329..331 CDD:409353
Ig strand D 337..341 CDD:409353
Ig strand E 344..348 CDD:409353
Ig strand F 358..365 CDD:409353
Ig strand G 368..378 CDD:409353
fn3 418..492 CDD:394996
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X32
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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