DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10492 and zcchc2

DIOPT Version :9

Sequence 1:NP_001097179.1 Gene:CG10492 / 35177 FlyBaseID:FBgn0032748 Length:810 Species:Drosophila melanogaster
Sequence 2:NP_001107693.1 Gene:zcchc2 / 779526 XenbaseID:XB-GENE-985101 Length:1031 Species:Xenopus tropicalis


Alignment Length:1068 Identity:219/1068 - (20%)
Similarity:326/1068 - (30%) Gaps:405/1068 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KQDVLQWFEK-LESYNRIETMYALLTACLPFELRFLGTLLEEQGRCDSETLRGMELRANNPHELA 67
            ::.|.:||.| |...||:|..|.||..|.|.||||||:.||:..|.|...||..|.:||.   ||
 Frog    45 RETVYRWFVKSLGPANRLEFAYGLLDLCNPLELRFLGSCLEDLARRDCHYLRECENKANG---LA 106

  Fly    68 ADMVNCQKGDPTDRKIRRKMALYLALIRACNRNCVSEIYRTL-------ECWGECDFSCINDQDT 125
            .:.:....|:|..   |.|:.:||||:.:.:|...|.:||.|       ...|..|    .::|:
 Frog   107 GEPLLGDLGEPIS---RAKLIIYLALLNSGSREVASRLYRLLLPEVGIERVLGGRD----REEDS 164

  Fly   126 L------LELLLVYTMAAIHPVFSMEEQKKIFGILAKIKENKLVAERFAPQMQRQTQTPVLQHPH 184
            .      .||||::|||::||.|:..::..:...|.:::|          .|.|:::.....:.:
 Frog   165 AEAATAREELLLLFTMASLHPAFTFHQRVTLRERLDRLRE----------AMGRKSRPEGSVNEY 219

  Fly   185 PPSPHDLV-----------------IQQQPPHVIHQI--PGPQQAPPHPQHPQMVQVLQTPQGNI 230
            .|:..|.|                 :|.:..| |.:|  .|.|:              :....|:
 Frog   220 LPNSEDHVSSNDSVCHNGISTVSHKLQNEAVH-IEKIAFKGAQR--------------KRADKNL 269

  Fly   231 PMIFPQHFQKLLPSSDGTHQI-SVDGMPH------LMQPN-ITIPADTSAIISHQNTG----WTM 283
            ...|.      :..||  |.: ||....|      ||.|| ::..|....|:...|.|    ...
 Frog   270 EYTFK------VTWSD--HSVTSVTKSHHELLEFLLMLPNELSREAFDETILRALNQGSQKREDR 326

  Fly   284 RHYVPQP-------PHQQPALQQQQPQSLDHQVPPASSP----------------MLSQQSSPSS 325
            ||...:|       ...|..||.|:.....:.:|..|||                :..:.||.:|
 Frog   327 RHTDLEPIIRLMFRSPSQALLQNQKVYKFFNSLPMESSPSRSIVQANQKSCKTPELFKEDSSEAS 391

  Fly   326 SRTTSPQRDRSLINVPL------------------QAQQQP------------------HQQQQM 354
            |:....|...::...||                  ...:||                  |.:..:
 Frog   392 SQEEENQHRLTIYKKPLGKCPVVKNTSTIKNSPTDGLHKQPCEQNGETDWRKSACPKSSHSEHCI 456

  Fly   355 RGMSQRMADQKNTRRPSAETTPPP-------------------------TSIGGEQQ------HD 388
            .....|..|..|.|..|.|.||..                         |::|.||.      ||
 Frog   457 NLEHARTVDNWNLRMTSREKTPSQRYNAEKLDGRSINRNNGVKTVQSLRTTVGKEQTLEVGSGHD 521

  Fly   389 SVNEGGSSNSSGTSLHR-----------------------LIRNG--FPRLG------------- 415
            :..|..|.:.|..|..|                       ..:||  ||..|             
 Frog   522 TCGETSSESYSSPSSPRHDRRESFESEDEKERDTDSNSDESTKNGPSFPTFGTVTAPIAKSVSLG 586

  Fly   416 -HNHRVKANTFIPQHQQ------------------------------------------------ 431
             ...||..|..:|::..                                                
 Frog   587 NDEARVNNNLHLPKYSHIPFLAPMHCMISNGSEKLDPVLISPGSVSSVREPFSQAPIGMGQKLVA 651

  Fly   432 ----QQQQH----------------HFQNPNYNMNVMMQSMNINDDGSGSMMNSMN-STKSAATT 475
                :.::|                :.|..|:.:::.:..:.|:.....:...:|| |.::....
 Frog   652 SATGESEKHIEILTPLPLPSTFLPRNCQPSNHALHLPVSRLKISSPQGPAETCTMNGSAQTGLAL 716

  Fly   476 GSESG--SSNGSCG-DLSPSETPTPTQLSLPLHNSVDAGMGMIT---------------TVLPTG 522
            |:.||  |.:.|.| ..|||..|.|    :..|.|...|:..:.               .|||: 
 Frog   717 GTASGFISGHSSVGFSPSPSAAPDP----ITKHLSQVVGLNQVVPHRDGGAMPPPTNLKLVLPS- 776

  Fly   523 LGNYQPKPHHFSYKQQQQQMNLQQRLNGRNGMDKTYQQ-------------------VYTTGTPS 568
             .|..|.|....|......: .....|..|....|...                   .:|.|...
 Frog   777 -TNLSPAPPAVPYPLPGATL-ASANTNVLNAAATTASSQPASVGIGLGQATVPPAVPTHTPGPAP 839

  Fly   569 IVSDAQTISSASLQQQQPQTLLISQSPVSTPTTTVLLQPQQPPPTTYNT---------------S 618
            ..|.|.|.|:|    |...|..||.:..:|.|...||.||...|....:               |
 Frog   840 SPSPALTHSTA----QSDSTPFISAAVNNTSTNGTLLTPQPVGPGACGSCGRRCSCGNNGGAPVS 900

  Fly   619 YPYHQRGPPP-----PQQT------IFQAHSAPPPQTVRGGFRYPMGPPHNGELIYPTFHTSLAF 672
            |.|....|.|     |..|      :.|||.:...|.......||.|..|:              
 Frog   901 YIYANTVPGPVYRGSPFLTFVNGTYLNQAHQSNGAQLPFYLTPYPNGLMHD-------------- 951

  Fly   673 LPMTAGGTPTAVTPAQLQSTAAVVSTNAVSVQTVPTPQQQQVPSTTPYSALTVCPITGAGGGGTA 737
             |:..|.|...:                           ||:|....:......|...|...|:.
 Frog   952 -PLLGGQTSYGM---------------------------QQIPGYGRFFPGYQTPNVVASANGSG 988

  Fly   738 PKV---ISCYNCGSQTHSGRECQEASME 762
            ||.   :||||||...|...:|::..||
 Frog   989 PKKSSNVSCYNCGLTGHYANDCKQPHME 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10492NP_001097179.1 PAT1 <164..>268 CDD:286811 23/130 (18%)
PHA03247 <591..702 CDD:223021 27/136 (20%)
zcchc2NP_001107693.1 zf-CCHC 997..1012 CDD:365871 7/14 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003742
OrthoInspector 1 1.000 - - otm47872
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5470
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.940

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