Protein Alignment Rpn3 and CSN3

DIOPT Version :9

• Sequence 1: NP_001260557.1
• Gene: Rpn3 / 35176
• FlyBaseID: FBgn0261396
• Length: 494
• Species: Drosophila melanogaster
• Sequence 2: NP_524190.2
• Gene: CSN3 / 40308
• FlyBaseID: FBgn0027055
• Length: 445
• Species: Drosophila melanogaster
• Alignment Length: 381
• Identity: 84/381 - (22%)
• Similarity: 143/381 - (37%)
• Gaps: 51/381 - (13%)

  Fly   131 LLLVKLIDASDLKRAGISADALMAKISIQNRRTLDLIGAKSYFY-----FSRVAELKN-SLEGIR 189
            :||.||..||......:....||... :|......|..|...||     |:.....|| |:.|||
  Fly    61 VLLAKLHSASTANPEPVQLIQLMRDF-VQRNNNEQLRYAVCAFYETCHLFTEFVVQKNLSILGIR 124

  Fly   190 SFLHA--RLRTATLRNDFEGQAVLIN---CLL----RNYLHYALYDQAD-----------KLVKK 234
            ....|  ::|      ..|.|...|:   |||    :|:.....|..||           |..::
  Fly   125 IISRAIDQIR------QLETQLTPIHADLCLLSLKAKNFSVVLPYLDADITDISTVAAECKTQQQ 183

  Fly   235 SVYPESASNNEWARFL---YYLGRIKAAKLEYSDAHKHLVQALRKSPQHAAIGFRQTVQKLIIVV 296
            .....:.:||:...||   ||.|.|..|...|..| .:..:....:|..|.........|..::|
  Fly   184 QQSQHADANNDAKYFLLYFYYGGMIYTAVKNYERA-LYFFEVCITTPAMAMSHIMLEAYKKFLMV 247

  Fly   297 ELL----LGNIPERVVFRQAGLRQSLGAYFQLTQAVRLGNLKRFGDVVSQYGPKFQLDHTFTLII 357
            .|:    :..||:........::.....|..|.......:.:....::.:|...|..|:...|..
  Fly   248 SLIVEGKIAYIPKNTQVIGRFMKPMANHYHDLVNVYANSSSEELRIIILKYSEAFTRDNNMGLAK 312

  Fly   358 RLRHNVIKTAIRSIGLSYSRISPQDIAKRLMLDSAEDAEFIVSKAIRDGVIEATLDPAQNFMRSK 422
            ::..::.|..|:.:..::..:|..|:|.|:.|.||.:||..:...|:.|.|.|:::.....:..|
  Fly   313 QVATSLYKRNIQRLTKTFLTLSLSDVASRVQLASAVEAERYILNMIKSGEIYASINQKDGMVLFK 377

  Fly   423 ESTDIYSTREPQLAFHERISFCLN-------LHNQSVKAMRYPPKSYGK---DLES 468
            :..:.|::.|..|.....|:..|:       :..:.:....|..|:.|.   ||.|
  Fly   378 DDPEKYNSPEMFLNVQNNITHVLDQVRQINKMEEEIILNPMYVKKALGSQDDDLTS 433

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpn3	NP_001260557.1	PCI	320..413	CDD:279707	21/92 (23%)
		Rpn3_C	426..484	CDD:285563	11/53 (21%)
CSN3	NP_524190.2	PCI	275..378	CDD:279707	21/102 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45438267
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10758
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940