DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10470 and tmco1

DIOPT Version :10

Sequence 1:NP_609936.1 Gene:CG10470 / 35174 FlyBaseID:FBgn0032746 Length:183 Species:Drosophila melanogaster
Sequence 2:NP_001002575.1 Gene:tmco1 / 378980 ZFINID:ZDB-GENE-050417-344 Length:188 Species:Danio rerio


Alignment Length:179 Identity:135/179 - (75%)
Similarity:157/179 - (87%) Gaps:0/179 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWSDTILIVFISVCTAFLGEGLTWVMVYRTEKYQKLKTEVEKQSKKLERRKEIHGDSLDKAVKKK 65
            |::|||||||||:|||.|.||:|||:||||:||::||.||||||||||::||...:|..:..|||
Zfish     4 MFADTILIVFISICTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGRQQKKK 68

  Fly    66 IERDEEKLKNNNRDLSLVKMKTMFATGFAFTALLSMFNSIFDGRVVAQLPFTPISWIQGLSHRNL 130
            |||.||||||||||||:|:||:|||.||.||||:.||||||||||||:|||.|:|:|||||||||
Zfish    69 IERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFVPLSYIQGLSHRNL 133

  Fly   131 SGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGVGLFGPAP 179
            .|:||||||||||||||||||||||||:||.||||||:||..|..||.|
Zfish   134 LGEDYTDCSFIFLYILCTMSIRQNIQKMLGLAPSRAATKQAGGFLGPPP 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10470NP_609936.1 EMC3_TMCO1 5..162 CDD:396507 121/156 (78%)
tmco1NP_001002575.1 EMC3_TMCO1 8..165 CDD:396507 121/156 (78%)

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