DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acn and AT4G39680

DIOPT Version :9

Sequence 1:NP_001260556.1 Gene:Acn / 35173 FlyBaseID:FBgn0263198 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001078515.1 Gene:AT4G39680 / 830123 AraportID:AT4G39680 Length:633 Species:Arabidopsis thaliana


Alignment Length:784 Identity:171/784 - (21%)
Similarity:267/784 - (34%) Gaps:265/784 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SSSPAPV----PV----------AVARRSRRSRKVSENEKTEVETPVVAQNNEAECPKVPPASQE 60
            ||||.||    |:          .:.||...:|.:.|.....::..:.|:..|         |:.
plant     2 SSSPFPVLDNRPIDKWKVTELKEELKRRRLTTRGLKEELVRRLDEALRAEQEE---------SER 57

  Fly    61 INEARASSEERAG----------------SGASPVRRSRGSRTTP------------RKRTESKG 97
            ||.|..::.|:|.                :..:||..:..:.|||            :..||:..
plant    58 INSATVAAAEKANQEPQMFPVTVGDRNQTTPVTPVEAAFSTETTPVTAEKTPEPTQTKITTEASA 122

  Fly    98 G----------DKKVDTIP----EEEPENGKDV------EKDAVEEEKTVAPPAANESESEDRAK 142
            |          :.:|:.:|    |:|.|...||      :...|..:..|...|::|.:||:...
plant   123 GVETTPAPVFSEPEVNAVPFASDEDEKEKVDDVRDIAGLDSSVVARDAAVVQVASSEHKSENNEP 187

  Fly   143 TE-----DQQAQDDESCAEPAV---------------VKDDDVEKEDLKPQQEVPTSTDDDTKQS 187
            ..     |.:||..|:..|.:.               ||.|.:..:.:...:::....:......
plant   188 FSGLDGGDSKAQPSEAVLEKSAMYNQVSEVIPVTGFEVKSDCISTDSVSNNEKIELKDNKIADNV 252

  Fly   188 EPEQEV-KVPSPSS-KDEEHLKTTSDVLDIQTEEVDERDEEASAPAERRETKKRHKEQIKEQQPA 250
            :.||.| |...||: ..|.|.....:.|: |...|...|:..:|.|          :.|||....
plant   253 KLEQNVNKFQEPSTVVGESHPMDVEEPLE-QKTSVGGGDDSNAANA----------DMIKENNII 306

  Fly   251 EEEEHKENHKQIDENPEQIHDEPADLSNDKHDPCLNSSATNTTGAPVLQQQRSVRKRKWLTNKKS 315
            :..:.::.:.......|.:.|||                                      ..|.
plant   307 DAGDSEKLNLDRSSGDESMEDEP--------------------------------------ETKQ 333

  Fly   316 SDRTPPVLAISTDSLKNIIADVVQPVPLSDVQLESSSEEEGLVTSDRDSERSASPAPPSEASKDR 380
            |:      :|::|.              ...::|..|:||.  .:|.|:.:..||...|......
plant   334 SE------SITSDD--------------KSAKIEMLSKEES--RADMDAGKGKSPENKSHPLVAS 376

  Fly   381 DNKGNTANTCDTTAEASADNEGA--------GAAPPAAADTVSA-------------QVSLSKAT 424
            |.:...||    ..||..:||.|        ....|.|..|.||             ..|.|.::
plant   377 DKRKLPAN----DQEAVGNNEPAKRRRWNSNSIKVPEAQITNSATPTTTPRSTGLKRDFSRSDSS 437

  Fly   425 VSTAAP-HIVRDPSPARNRASHVLYITNLVRPFTVLQLKGLLARTGKIVEEDGFWIDRIKSKCYV 488
            ||...| ..|..|||  ...::.|.|...:||||:..::.||.:||.:.   .||:|.||:.|||
plant   438 VSEDGPKERVVPPSP--KEPTNSLRIDRFLRPFTLKAVQELLGKTGNVT---SFWMDHIKTHCYV 497

  Fly   489 AYSTEDEAIETRHALHGVRWPVSNPKCLNVDFGSRTDMDRAILSTKDEAPRYGQENTRDNQQSGN 553
            :|.:.:||..||.|::.::||.:..:.|..:|....:     :..|.|||...|.   .:|....
plant   498 SYPSVEEAAATREAVYNLQWPPNGGRHLIAEFVRAEE-----VKEKLEAPLPPQP---QHQPQAQ 554

  Fly   554 AWSRLEPSDKKPARPVREWDVGKKEPSDHDKHSNDRRRDSKDRLDSRSRDAERAGQERKRSRDRE 618
            ..||..|:...|..|:      .|.|                                       
plant   555 TLSRPPPTALPPPPPL------AKPP--------------------------------------- 574

  Fly   619 GRGRDRERERLDRNAHARSRSGSPASK--TKKENEPPIRLLDDLFRKTKGTPCIYWLPLTPEAIA 681
                           |...|...|...  ..:|.||||..|||||:|||..|.||:|||:.|.:|
plant   575 ---------------HVVERLPLPPPPPIAPEEQEPPIVTLDDLFKKTKAIPRIYYLPLSEEQVA 624

  Fly   682 EKEA 685
            .|.|
plant   625 AKLA 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcnNP_001260556.1 RRM_ACINU 444..530 CDD:240878 28/85 (33%)
RSB_motif 600..691 CDD:292910 26/88 (30%)
AT4G39680NP_001078515.1 SAP 14..48 CDD:128789 4/33 (12%)
PRK10856 <50..>143 CDD:236776 18/101 (18%)
RRM_ACINU 456..540 CDD:240878 29/91 (32%)
RSB_motif <599..629 CDD:374477 18/30 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 82 1.000 Domainoid score I2936
eggNOG 1 0.900 - - E1_KOG2416
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 131 1.000 Inparanoid score I1869
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005012
OrthoInspector 1 1.000 - - oto2987
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3543
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.950

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