DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acn and acin1b

DIOPT Version :9

Sequence 1:NP_001260556.1 Gene:Acn / 35173 FlyBaseID:FBgn0263198 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001292511.1 Gene:acin1b / 327495 ZFINID:ZDB-GENE-030826-12 Length:1259 Species:Danio rerio


Alignment Length:998 Identity:264/998 - (26%)
Similarity:401/998 - (40%) Gaps:309/998 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SERKKS--SSPAPVPVAVA-RRSRRSRKVSENEKTEVE------------TPVVAQNNE-----A 49
            |..||:  :.||..|.|.| :||||..:..::...:::            ||..:...|     .
Zfish   269 SHGKKNVRAPPARAPPAAAPQRSRRKLQPPQHIPPQLQPVLQPPLQLRQPTPPPSPPPELSFPLP 333

  Fly    50 ECPKVPPASQE--------------------INEARASSEERAGSGASPVRRSRGSRTTPRKRTE 94
            :.||..|..|:                    :....:||..|:.|...|..|..|..:...::.|
Zfish   334 DTPKQSPHDQDEPAGLAEAAVPGPGMVSPPSLTRQESSSSSRSSSPEPPSTRKPGPLSLLVRKME 398

  Fly    95 SKG-------------GDKKVD--------------------------TIP-------------- 106
            |:|             ||.:|:                          |:|              
Zfish   399 SEGVFGSAQNIEVKGEGDMEVEEQEHSEAAVQDSTRELSRTDVSSSVSTMPPDQQGIQDSELEKG 463

  Fly   107 EEEPENGKDVEKDAVEEEKT--------------------VAPPAANESESEDR---------AK 142
            |:||:..::.:.:.|:|...                    |.||.:..|.|:..         ..
Zfish   464 EDEPKPSEETQNEKVDETSVPLCSTSTTTRSSRRQRIFSEVPPPESLMSPSKPEQLSMLTSISKG 528

  Fly   143 TEDQQAQDDESCAEPAVVKDDDVEKEDLKPQ--QEVPTSTDDDTK-------QSEPEQEVKVPSP 198
            :||...:.:|....||....:|.|.:.|..:  :|.|...|::.|       .||.|:..|....
Zfish   529 SEDSPMETEEFTTTPASKHKEDKELKGLNNEAPEESPKPADENKKALTSPHATSEEEKMDKTRDR 593

  Fly   199 SSKDEEHLKTTSDVLDIQTEEVDERDEEASAPAERRETKKRHKEQIKEQ-QPAEEEEHKENHKQI 262
            |.||:....|:|.......:........:|:|:..:.:.....:.::|: :...||:..::.:::
Zfish   594 SKKDKRRSSTSSQSSSSDADSESSSSHSSSSPSRDKSSPTSKTKDVEEKGRKGAEEKKAQSSREV 658

  Fly   263 DENP----------------------EQIHDEPADLSNDKHDPCLNSSATNTTGAPVLQQQRSV- 304
            .:..                      :|...:.||.|:.:.:   .|||..:..|..:...... 
Zfish   659 KQEALSEPTGQVAMELEGLSHSESAVQQSDHQGADSSDSRPE---ESSAAKSFAARKISLSSKTE 720

  Fly   305 -------------RKRKW-----LTNKKSSDRTPPVLAISTDSLKNIIADVVQPVPLSDVQLESS 351
                         |||:|     :|.||      |.::|:|:|||.:|.| ::|:..:.|.|.  
Zfish   721 IASSESEPVGGASRKRRWGSSTAVTAKK------PSISITTESLKTLIPD-IKPLQEAVVDLH-- 776

  Fly   352 SEEEGLVTSDRDS-----------------ERSASPAPPSE----ASKDRDNKGNTANTCDTTAE 395
             .:||.::.|.||                 .|:.:...||:    ..|:.|.|....:..|...|
Zfish   777 -PDEGRLSVDEDSSGPREREEPEEDQGLKIRRTVTQIVPSDGHENGQKEMDEKDEEEDEDDEEEE 840

  Fly   396 ASADNE------GAGAAPPAAADT--------------VSAQVSLSKATVSTAAPHIVRDP---- 436
            .....|      ...::|.|:.:|              |...:|..|:.||..    :.||    
Zfish   841 QKHSGEEKEKPRKQESSPDASVETPECDSQKVTPSDSLVRRSISQQKSGVSIT----IDDPIRTG 901

  Fly   437 ---SPARNRASHVLYITNLVRPFTVLQLKGLLARTGKIVEEDGFWIDRIKSKCYVAYSTEDEAIE 498
               ||.|.:.|:::::.:||||||:.|||.||.|||.:||| |||||:|||.|||.|||.:||:.
Zfish   902 RQLSPPRGKTSNIIHVLHLVRPFTLGQLKLLLNRTGTMVEE-GFWIDKIKSHCYVTYSTVEEAVA 965

  Fly   499 TRHALHGVRWPVSNPKCLNVDFGSRTDMD--RAILSTKDEAPRYGQENTRDNQQSGNAWSRLEPS 561
            ||.|||||:||.||||.|.|||..:.::|  :.::|  .|....|    .|.:.||       ||
Zfish   966 TREALHGVKWPASNPKVLRVDFSDQDELDFHKGLIS--GERAGVG----HDPKASG-------PS 1017

  Fly   562 DKKPAR--PVREWDVGKKEPSDHDKH-SNDRRRDS-----KDRLDSRSRDAERAGQERKRS---- 614
            .:.||.  |:        .|.:|:|. ..:|.||.     :|:...|.|..||  :||.||    
Zfish  1018 SRPPAAHPPI--------PPPNHEKEKERERDRDGGSSAVRDQWAERERAMER--RERTRSEREW 1072

  Fly   615 ------------RDREGRGRDRERERLDRNAHARSRSGSPASKTKKENEPPIRLLDDLFRKTKGT 667
                        |||..|.|.|||.|.:|......|:    .|.:|..|||::||||||.|||..
Zfish  1073 DRDKVKDFGREERDRTRRSRSRERRRRERGKSKEKRT----EKKEKPEEPPVKLLDDLFHKTKAA 1133

  Fly   668 PCIYWLPLTPEAIAEKEAFRQKRIEEHKLRIKE--------REERQKEREKDRDR----QRET-- 718
            |||||||||.|...:::..|..||:|.:.|.||        |:||::||.|.|||    ..||  
Zfish  1134 PCIYWLPLTDEQATQRDQERADRIKEREKRRKEIFEEEDKKRKEREQERAKGRDRVGGNTAETRA 1198

  Fly   719 ---RRNRSNERRRSRSRERERRR 738
               ||:...||.|.:..||||.|
Zfish  1199 GVPRRSTEGERDRGKGGERERGR 1221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AcnNP_001260556.1 RRM_ACINU 444..530 CDD:240878 52/87 (60%)
RSB_motif 600..691 CDD:292910 44/106 (42%)
acin1bNP_001292511.1 SAP 14..48 CDD:280251
RRM_ACINU 912..998 CDD:240878 52/86 (60%)
RSB_motif <1122..1157 CDD:292910 20/34 (59%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596489
Domainoid 1 1.000 165 1.000 Domainoid score I3864
eggNOG 1 0.900 - - E1_KOG2416
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 268 1.000 Inparanoid score I3001
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005012
OrthoInspector 1 1.000 - - otm24718
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46589
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3543
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.940

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