DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ttc19 and ttc19

DIOPT Version :9

Sequence 1:NP_609934.3 Gene:Ttc19 / 35172 FlyBaseID:FBgn0032744 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_001333173.1 Gene:ttc19 / 564788 ZFINID:ZDB-GENE-070912-490 Length:403 Species:Danio rerio


Alignment Length:415 Identity:98/415 - (23%)
Similarity:176/415 - (42%) Gaps:72/415 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLVRNICK--FTQVMGRFRVVVN--PRDYCHLAP------------------LKRS-----RYHQ 38
            |.:|:.|:  ..||. |.::..|  ||:    ||                  |.||     |:|:
Zfish     1 MALRSYCRQLAAQVF-RLKLCGNECPRN----APGCSFSLAGIKSLHEPTGVLARSSRCVKRWHR 60

  Fly    39 RSEFGCRPL----------CSNAAGYEVSWAAPPASGSSGGMFWAFSAAFTLNLFGGADEK--EE 91
            ||...|..|          .::.:.:.::|.|.           |||      ||||:|||  |:
Zfish    61 RSWHRCASLQMPSQKSHSDTTDFSRWTLAWGAV-----------AFS------LFGGSDEKTEEQ 108

  Fly    92 TPEEKLIKTIKRSILCIQREQYDKAEQMLHLALRMAQDIQSKDGITYVFDLMANLAMEREQFKKA 156
            ..|::||..:|::...:...:.|.|:..||.|:|:|..:.:.|.|.|.:.||||||..|.|...|
Zfish   109 KLEDELILLLKKAKYSMMIGELDAADGFLHRAVRLAHQMHNNDAIIYTYSLMANLAFVRGQLDNA 173

  Fly   157 EKIFTDVMKRLFAEGHTEESPKILHISSKIAHMSQLQGDLEKSFQGFTWTLQQLAKLLEKMPD-- 219
            ||:|...|..:.:.|..::...::.:|.|:|.:...|...|.:..||.:....|...::|..|  
Zfish   174 EKLFKAAMSFMLSGGTPQDDNALIEMSLKLASIYATQNKNELAEHGFQFCTDSLEAKMDKQKDLP 238

  Fly   220 --------DKDILELYGLTKNWFGQLLMKQGKYLEAKNLFKEAFDTLINVYGAVNDASVTILNNI 276
                    .||...|.||:.:...:.|....:::.|...::.|........|..:..::.:::::
Zfish   239 PESLSDEERKDTRLLLGLSLDARARYLAANHRFIGACRDYRHALQICQEEQGESHPQTLVLMSDL 303

  Fly   277 SVAYVNLEKYAEARETLLEAMELTKELKDATQEGILQANLGLVYLREGLMSQAENACRLAWKLGK 341
            :.......|:.||...:.:|:||.:......|. :|..|:..:.:..|...::....:.|..|..
Zfish   304 ATVLDLQGKHDEALVYVKKAVELGQAAGHPEQH-VLLGNMAGILMHNGEFEESAKLYQEALALAH 367

  Fly   342 QHQNPDAVEQAEYCLNEIKTTLNGE 366
            ...:.:|:||.:..|.|:....|.:
Zfish   368 TAGDAEAIEQLQEGLKELDNRRNAK 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ttc19NP_609934.3 TPR_12 235..302 CDD:290160 10/66 (15%)
TPR repeat 269..299 CDD:276809 4/29 (14%)
TPR_11 272..339 CDD:290150 11/66 (17%)
TPR repeat 304..338 CDD:276809 5/33 (15%)
ttc19NP_001333173.1 TPR 1 154..187 14/32 (44%)
TPR 2 297..330 6/32 (19%)
TPR 3 336..369 5/33 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596021
Domainoid 1 1.000 82 1.000 Domainoid score I8391
eggNOG 1 0.900 - - E2759_KOG1840
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9831
Inparanoid 1 1.050 99 1.000 Inparanoid score I5006
OMA 1 1.010 - - QHG46748
OrthoDB 1 1.010 - - D369100at33208
OrthoFinder 1 1.000 - - FOG0007221
OrthoInspector 1 1.000 - - oto38731
orthoMCL 1 0.900 - - OOG6_107899
Panther 1 1.100 - - LDO PTHR13143
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4032
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

Return to query results.
Submit another query.