DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ttc19 and klc1a

DIOPT Version :9

Sequence 1:NP_609934.3 Gene:Ttc19 / 35172 FlyBaseID:FBgn0032744 Length:369 Species:Drosophila melanogaster
Sequence 2:XP_005156690.1 Gene:klc1a / 393928 ZFINID:ZDB-GENE-040426-1599 Length:647 Species:Danio rerio


Alignment Length:283 Identity:65/283 - (22%)
Similarity:118/283 - (41%) Gaps:57/283 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 EKEETPEEKLIKTIKRSILCIQREQ--YDKAEQMLHLALRMAQDIQSKD--GITYVFDLMANLAM 148
            ||....:...:.|:...:..:.|:|  |.:|..:|:.||.:.:....:|  .:....:.:|.|..
Zfish   249 EKTSGHDHPDVATMLNILALVYRDQNKYKEAANLLNDALAIREKTLGRDHPAVAATLNNLAVLYG 313

  Fly   149 EREQFKKAE---KIFTDVMKRLFAEGHTEESPKILHISSKIAHMSQLQGDLEKSFQGFTWTLQQL 210
            :|.::|:||   |...::.:::..:.|    |.:....:.:|.:.|.||..|:    ..:..|:.
Zfish   314 KRGKYKEAEPLCKRALEIREKVLGKDH----PDVAKQLNNLALLCQNQGKYEE----VEYYYQRA 370

  Fly   211 AKLLEKM--PDDKDILELYGLTKNWFGQLLMKQGKYLEAKNLFKEAFDTL-INVYGAVNDASVTI 272
            .::.:..  |||.::.:    |||......:||||:.:|:.|:||..... ...:|:|:|.:..|
Zfish   371 LEIYQTKLGPDDPNVAK----TKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPI 431

  Fly   273 LNNISVAYVNLEKYAEARETLLEAMELTK-ELKDATQEG-----------------ILQANLGLV 319
            .           .:||.||      |.:| :.||.|..|                 ....|||.:
Zfish   432 W-----------MHAEERE------EQSKIKQKDGTPFGEYGGWYKACKVDSPTVTTTLKNLGAL 479

  Fly   320 YLREGLMSQAENACRLAWKLGKQ 342
            |.|:|....||.....|.:..||
Zfish   480 YRRQGKFEAAETLEEAALRSRKQ 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ttc19NP_609934.3 TPR_12 235..302 CDD:290160 18/68 (26%)
TPR repeat 269..299 CDD:276809 5/29 (17%)
TPR_11 272..339 CDD:290150 20/84 (24%)
TPR repeat 304..338 CDD:276809 13/50 (26%)
klc1aXP_005156690.1 TPR_12 215..292 CDD:290160 10/42 (24%)
TPR_10 218..258 CDD:290111 2/8 (25%)
TPR repeat 219..246 CDD:276809
TPR_12 256..334 CDD:290160 16/77 (21%)
TPR_10 259..299 CDD:290111 9/39 (23%)
TPR repeat 260..288 CDD:276809 7/27 (26%)
TPR_12 298..375 CDD:290160 15/84 (18%)
TPR_10 301..342 CDD:290111 8/44 (18%)
TPR repeat 302..330 CDD:276809 7/27 (26%)
TPR_12 340..418 CDD:290160 22/89 (25%)
TPR_10 343..384 CDD:290111 9/44 (20%)
TPR repeat 343..373 CDD:276809 6/33 (18%)
TPR_10 385..422 CDD:290111 11/40 (28%)
TPR repeat 386..413 CDD:276809 11/30 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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