DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ttc19 and Klc2

DIOPT Version :9

Sequence 1:NP_609934.3 Gene:Ttc19 / 35172 FlyBaseID:FBgn0032744 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_001356290.1 Gene:Klc2 / 16594 MGIID:107953 Length:636 Species:Mus musculus


Alignment Length:284 Identity:66/284 - (23%)
Similarity:123/284 - (43%) Gaps:35/284 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 EKEETPEEKLIKTIKRSILCIQREQ--YDKAEQMLHLALRMAQDIQSKD--GITYVFDLMANLAM 148
            ||....:...:.|:...:..:.|:|  |..|..:|:.||.:.:....||  .:....:.:|.|..
Mouse   229 EKTSGHDHPDVATMLNILALVYRDQNKYKDAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYG 293

  Fly   149 EREQFKKAE---KIFTDVMKRLFAEGHTEESPKILHISSKIAHMSQLQGDLEKSFQGFTWTLQQL 210
            :|.::|:||   |...::.:::..:.|    |.:....|.:|.:.|.||..|:....:...|:..
Mouse   294 KRGKYKEAEPLCKRALEIREKVLGKFH----PDVAKQLSNLALLCQNQGKAEEVEYYYRRALEIY 354

  Fly   211 AKLLEKMPDDKDILELYGLTKNWFGQLLMKQGKYLEAKNLFKEAFDTL-INVYGAVN---DASV- 270
            |..|.  |||.::.:    |||......:|||||.:|:.|:||..... ...:|:||   :.|| 
Mouse   355 ATRLG--PDDPNVAK----TKNNLASCYLKQGKYQDAETLYKEILTRAHEKEFGSVNARLERSVW 413

  Fly   271 ------TILNNISVAYVNLEKYAEARETLLEAM------ELTKELK-DATQEGILQANLGLVYLR 322
                  ::|......:::.|:..|:::...::.      ...|..| |:........:||.:|.|
Mouse   414 QAGDSPSLLGENKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRR 478

  Fly   323 EGLMSQAENACRLAWKLGKQHQNP 346
            :|.:..|......|.:..||..:|
Mouse   479 QGKLEAAHTLEDCASRSRKQGLDP 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ttc19NP_609934.3 TPR_12 235..302 CDD:290160 17/83 (20%)
TPR repeat 269..299 CDD:276809 5/42 (12%)
TPR_11 272..339 CDD:290150 13/73 (18%)
TPR repeat 304..338 CDD:276809 9/34 (26%)
Klc2NP_001356290.1 SMC_prok_B <9..>139 CDD:274008
TPR_12 197..272 CDD:315987 10/42 (24%)
TPR repeat 199..226 CDD:276809
TPR_12 238..314 CDD:315987 17/75 (23%)
TPR repeat 240..268 CDD:276809 7/27 (26%)
TPR_12 281..354 CDD:315987 16/76 (21%)
TPR repeat 282..310 CDD:276809 7/27 (26%)
TPR_12 322..396 CDD:315987 24/79 (30%)
TPR repeat 323..353 CDD:276809 7/29 (24%)
TPR repeat 366..393 CDD:276809 12/30 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1840
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.