DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ttc19 and Klc1

DIOPT Version :9

Sequence 1:NP_609934.3 Gene:Ttc19 / 35172 FlyBaseID:FBgn0032744 Length:369 Species:Drosophila melanogaster
Sequence 2:XP_036013090.1 Gene:Klc1 / 16593 MGIID:107978 Length:637 Species:Mus musculus


Alignment Length:311 Identity:70/311 - (22%)
Similarity:128/311 - (41%) Gaps:63/311 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 EKEETPEEKLIKTIKRSILCIQREQ--YDKAEQMLHLALRMAQDIQSKD--GITYVFDLMANLAM 148
            ||....:...:.|:...:..:.|:|  |..|..:|:.||.:.:....:|  .:....:.:|.|..
Mouse   244 EKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGRDHPAVAATLNNLAVLYG 308

  Fly   149 EREQFKKAE---KIFTDVMKRLFAEGHTEESPKILHISSKIAHMSQLQG---DLEKSFQGFTWTL 207
            :|.::|:||   |...::.:::..:.|    |.:....:.:|.:.|.||   ::|..:|      
Mouse   309 KRGKYKEAEPLCKRALEIREKVLGKDH----PDVAKQLNNLALLCQNQGKYEEVEYYYQ------ 363

  Fly   208 QQLAKLLEKM-PDDKDILELYGLTKNWFGQLLMKQGKYLEAKNLFKEAFDTL-INVYGAVNDASV 270
            :.|.....|: |||.::.:    |||......:||||:.:|:.|:||..... ...:|:|:|.:.
Mouse   364 RALGIYQTKLGPDDPNVAK----TKNNLASCYLKQGKFKQAETLYKEILTRAHEREFGSVDDENK 424

  Fly   271 TILNNISVAYVNLEKYAEARETLLEAMELTKELKDATQEG-----------------ILQANLGL 318
            .|.           .:||.||      |...:.||.:..|                 ....|||.
Mouse   425 PIW-----------MHAEERE------ECKGKQKDGSAFGEYGGWYKACKVDSPTVTTTLKNLGA 472

  Fly   319 VYLREGLMSQAENACRLAWKLGKQHQNPDAVEQAEYCLNEIKTTLNGEKRQ 369
            :|.|:|....||.....|.:..||..:....::....||:.::.   |||:
Mouse   473 LYRRQGKFEAAETLEEAAMRSRKQGLDNVHKQRVAEVLNDPESM---EKRR 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ttc19NP_609934.3 TPR_12 235..302 CDD:290160 17/67 (25%)
TPR repeat 269..299 CDD:276809 5/29 (17%)
TPR_11 272..339 CDD:290150 18/83 (22%)
TPR repeat 304..338 CDD:276809 12/50 (24%)
Klc1XP_036013090.1 SMC_prok_B 35..>149 CDD:274008
TPR_12 212..287 CDD:315987 10/42 (24%)
TPR repeat 214..241 CDD:276809
TPR_12 253..329 CDD:315987 16/75 (21%)
TPR repeat 255..283 CDD:276809 7/27 (26%)
TPR_12 296..370 CDD:315987 16/83 (19%)
TPR repeat 297..325 CDD:276809 7/27 (26%)
TPR_12 337..411 CDD:315987 22/83 (27%)
TPR repeat 338..368 CDD:276809 7/35 (20%)
TPR repeat 381..408 CDD:276809 11/30 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1840
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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