DRSC/TRiP Functional Genomics Resources

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Protein Alignment mib2 and nbr1b

DIOPT Version :10

Sequence 1:NP_609933.1 Gene:mib2 / 35170 FlyBaseID:FBgn0086442 Length:1049 Species:Drosophila melanogaster
Sequence 2:NP_001373572.1 Gene:nbr1b / 555713 ZFINID:ZDB-GENE-170215-1 Length:992 Species:Danio rerio


Alignment Length:991 Identity:187/991 - (18%)
Similarity:304/991 - (30%) Gaps:361/991 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PNWIWSNQDDGEGH-----VGTVCE--IGRCGSTHSPENTVVVNWDSGHRTNYRVGYQNQYDLII 72
            |.|..|..:..:..     |..:|.  .|:| ..|.|                 ||.:.|.. .:
Zfish   163 PAWFTSYMEKFKDQVVREAVEKICREFSGQC-CIHKP-----------------VGAEAQVP-EV 208

  Fly    73 VDNAQVGVRHSNVVCDGCSKAGIAGIVFKCAQCPNYHLCAYCYAEDLHDIEHPFIRYTTPNSLGV 137
            ..:...|...|...|..| :...||..::|:.|.:..||..|...  ||..|..:|..||.|:..
Zfish   209 TSSTLPGAPSSAPACSSC-RGQTAGGGYQCSVCTSCTLCEPCSFS--HDPSHNLVRARTPLSIPE 270

  Fly   138 RLPMRKGAKRIQLRGIFVGSKVVRGPDWEWNEQDGGEGRTGRVMEIRGWDNESCRSVANVAWVTG 202
            .........|...||                      .|:.|..|.:....|..:..|.|..:..
Zfish   271 HGSPAPDHSRFYRRG----------------------DRSFRKAEKQRLKAEKRQLKAEVKEIRK 313

  Fly   203 STNVYRLGHKGNVDLKYITATCGGHYYKDHMPVLGQTEELQPVA-------------PMVKPSFS 254
            ...:.|.|      |::.||..|     :..|||     |||.|             |:..|:.:
Zfish   314 QLRMERRG------LQWSTAGEG-----NSSPVL-----LQPRATQANSPDRPKRPCPLAVPAMT 362

  Fly   255 V---------GDRV----------------KVCLEVDALMKLQQGHGGWNPRMVEHLSKLGTVHR 294
            .         |.|:                :||.:.:..:|..     |                
Zfish   363 ALLLDENLPDGSRLRPGTKFIKYWKMKNSGRVCWDSETKLKFM-----W---------------- 406

  Fly   295 ITDKGDIRVQYENCPNRW------TFHPAALVKVVSFRV------GDLVTIINDANKVQQLQKGH 347
                |::.|   ....||      |..|.. |.|||..:      |...:....|::.:|.  |.
Zfish   407 ----GNLAV---GSGERWREVPVPTLQPGQ-VGVVSVALCAPTIEGTYTSHWRLAHRGEQF--GP 461

  Fly   348 GEWIEIM--RHALGKICKVVKVYSDGDLRIQQLDDGFEWTLNPKCVKLERSPLATAAERSNSMMD 410
            ..|..|:  .||...||      :||                     |..||..|..|:|:..::
Zfish   462 RVWCSIVVDPHAPTAIC------ADG---------------------LLVSPCVTPQEKSSRTLE 499

  Fly   411 LSHR-RADHVMTPLSGLSGSSVADKLVREAAQGHLDFVRQYLDVN---------PSQVDVMSGGK 465
            ...: ||          ||    |:|:              |.||         || ||:::.  
Zfish   500 REEKCRA----------SG----DQLL--------------LSVNQDCDQEFYIPS-VDLLTA-- 533

  Fly   466 ACIQVASHQGYVDLVSYLISKGANVNAVDKEGDSALHYAAFGNQPATMRVLLQHGAEVNFLNSSH 530
                       .||:|:.:   .::|.| :|.:|..:     |.||                   
Zfish   534 -----------QDLLSFEL---LDINIV-QELESVPN-----NTPA------------------- 559

  Fly   531 CSALHICAHKKTPHCVREL-----LQHNANVNI----QDSYGDTALHDAIGKENTEVVELLCNAP 586
                      .|..|:..|     ||....:.:    .::.|.:.:||    :.||    |...|
Zfish   560 ----------DTTPCISPLPHDGPLQEKPTLGLIQEETEAQGVSNIHD----QGTE----LEGVP 606

  Fly   587 NLDFTVKNNRGFNVLHHAALKG-NVVAARRILLLSRQLVNVRKDDGFAALHLAALNGHAQVVETL 650
            ..:...:|:.|...:..:.::. .:..|.|..|..|....|.:.....::.|......: |.||.
Zfish   607 AQEKGEENSIGPQFVSPSVIRSLTLEVAERGALCGRYPAKVVRPAPQGSMSLCERQSKS-VSETG 670

  Fly   651 VTEGQAELDIRNNRQQTP-------------------FLLAVSQGHAGVIERLVRLSCDVNAKDE 696
            :....|.|.:.......|                   .|::...||...||:::......:|.:|
Zfish   671 LISAPAPLKVEAPLLSDPTSPQTETTEITVPLLTLPAHLISTDDGHESDIEQILLEPAGGDAVEE 735

  Fly   697 DGDNAMHLCVIKKSNLQSAAEPQPEEAPEIHKFYLSLVHSSIRPEDRLMYSILIYLSRAGCRVEL 761
            ..:.     |.||..|:     .||...|:..     ..||...||   |.|::           
Zfish   736 GEEE-----VDKKEQLK-----DPEAPKEVRS-----RTSSASSED---YIIIL----------- 771

  Fly   762 NNANASIFEWITDRHIRQLIF----GQQGEAESLPRNLQALEVSAGSADGEESSASAGAESNGAG 822
                ...|:  |.|.:.:.::    .|.|:..:....|:::|    :.:.:..:|:|..::|...
Zfish   772 ----PDCFD--TSRPLGESMYSSALSQPGDEPTEGEKLESVE----TPELQNPAAAASVDANDML 826

  Fly   823 PGSVAAPPPPQRQTFELMPKPNDIPAIGVGASPSTPSASPGVKKLNSDATPQNVS-PQVAPRKKA 886
            ..|         ||.:.:|.   .|.|.|...||..|.:...::::..|..|..| |..|..|:.
Zfish   827 CAS---------QTLDAVPL---TPVIVVAPRPSVRSCAETQEQMDDGAKEQEGSDPTEAGDKEK 879

  Fly   887 PKPPVTTSSSSTALEA 902
            ...|....|.:|...|
Zfish   880 DSEPNQPDSENTLASA 895

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mib2NP_609933.1 MIB_HERC2 8..74 CDD:461991 12/65 (18%)
ZZ_Mind_bomb 85..129 CDD:239079 12/43 (28%)
MIB_HERC2 156..220 CDD:461991 9/63 (14%)
SH3_15 253..319 CDD:465720 12/96 (13%)
SH3_15 325..391 CDD:465720 12/73 (16%)
ANKYR 398..664 CDD:440430 51/285 (18%)
ANK repeat 464..494 CDD:293786 4/29 (14%)
ANK repeat 496..527 CDD:293786 5/30 (17%)
ANK repeat 529..560 CDD:293786 5/39 (13%)
ANK repeat 596..628 CDD:293786 6/32 (19%)
ANK repeat 630..662 CDD:293786 6/31 (19%)
Ank_5 650..705 CDD:433530 10/73 (14%)
ANK repeat 664..695 CDD:293786 7/49 (14%)
PRK14959 <791..>919 CDD:184923 25/113 (22%)
RING-HC_MIB2_rpt1 918..955 CDD:438386
RING-HC_MIBs-like 1004..1042 CDD:438183
nbr1bNP_001373572.1 PB1_NBR1 5..85 CDD:99718
ZZ 223..261 CDD:412288 12/40 (30%)
NBR1_like 363..470 CDD:271343 22/137 (16%)
UBA_NBR1 944..980 CDD:270504
Blue background indicates that the domain is not in the aligned region.

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