DRSC/TRiP Functional Genomics Resources

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Protein Alignment mib2 and Mib1

DIOPT Version :9

Sequence 1:NP_001260554.1 Gene:mib2 / 35170 FlyBaseID:FBgn0086442 Length:1049 Species:Drosophila melanogaster
Sequence 2:NP_001351926.1 Gene:Mib1 / 225164 MGIID:2443157 Length:1006 Species:Mus musculus


Alignment Length:1114 Identity:384/1114 - (34%)
Similarity:546/1114 - (49%) Gaps:194/1114 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GIRVVRGPNWIWSNQDDGEGHVGTVCEIGRCGSTHSPENTVVVNWDSGHRTNYRVGYQNQYDLII 72
            |.||||||:|.|..||.||||||||      .|..|||..||| ||:|...|||.  ...|||.|
Mouse    15 GARVVRGPDWKWGKQDGGEGHVGTV------RSFESPEEVVVV-WDNGTAANYRC--SGAYDLRI 70

  Fly    73 VDNAQVGVRHSNVVCDGCSKAGIAGIVFKCAQCPNYHLCAYCYAEDLHDIEHPFIRYTTPNSLGV 137
            :|:|..|::|...:||.|.:..|.||.:|||:|.||.||..||..|.|.:.|.|.|.|||.|..|
Mouse    71 LDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDKHHLRHRFYRITTPGSERV 135

  Fly   138 RLPMRKGAKRIQLRGIFVGSKVVRGPDWEWNEQDGGEGRTGRVMEIRGWDNESCRSVANVAWVTG 202
            .|..|:.:|:|..||||.|::||||.||:|.:||||.||.|:|.||:.|...|..|.|.|.|..|
Mouse   136 LLESRRKSKKITARGIFAGARVVRGVDWQWEDQDGGNGRRGKVTEIQDWSASSPHSAAYVLWDNG 200

  Fly   203 STNVYRLGHKGNVDLKYITATCGGHYYKDHMPVLG-QTEELQPVAPMVKPSFSVGDRVKVCLEVD 266
            :.|:||:|.:|..|||.:....||.:|:||.|||| |.....|      ....:||.|.:.|:::
Mouse   201 AKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGNRNP------GGLQIGDLVNIDLDLE 259

  Fly   267 ALMKLQQGHGGWNPRMVEHLSKLGTVHRITDKGDIRVQYENCPNRWTFHPAALVK---------- 321
            .:..||.|||||...|.|.|:..|||..|.:..||.|||.: .|||||:||.|.|          
Mouse   260 IVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS-GNRWTFNPAVLTKANIVRSGDAA 323

  Fly   322 ------VVSFRVGDLVTIINDANKVQQLQKGHGEWIEIMRHALGKICKVVKVYSDGDLRIQQLDD 380
                  ...|:|||||.:..|..:::.||:|||||.|.|...|||:.:|.::|||.||:::..  
Mouse   324 QGAEGGTSQFQVGDLVQVCYDLERIKLLQRGHGEWAEAMLPTLGKVGRVQQIYSDSDLKVEVC-- 386

  Fly   381 GFEWTLNPKCVKLERSPLATAAERSNSMMDLSHRRADHVMTPLSGLSGS-SVADKLVREAAQGHL 444
            |..||.||..|       :..|...:::.:.|..|...::..|.....| .:.::||:.||.|.:
Mouse   387 GTSWTYNPAAV-------SKVAPAGSAISNASGERLSQLLKKLFETQESGDLNEELVKAAANGDV 444

  Fly   445 DFVRQYLDVNPSQVDVMSGGKACIQVASHQGYVDLVSYLISKGANVNAVDKEGDSALHYAAFGNQ 509
            ..|...|......|:....|...:|.||..|:||::..|:.:..:|.|.||:||.|:|:||||::
Mouse   445 AKVEDLLKRPDVDVNGQCAGHTAMQAASQNGHVDILKLLLKQNVDVEAEDKDGDRAVHHAAFGDE 509

  Fly   510 PATMRVLLQHGAEVNFLNSSHCSALHICAHKKTPHCVRELLQHNANVNIQDSYGDTALHDAIGKE 574
            .|.:.||.:..|::|..|....:.|||..:|.....|:.||....:.::|||.|||.|||||.|:
Mouse   510 GAVIEVLHRGSADLNARNKRRQTPLHIAVNKGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKK 574

  Fly   575 NTEVVELLCNAPNLDFTVKNNRGFNVLHHAALKGNVVAARRILLLSR----QLVNVRKDDGFAAL 635
            ..:::.:|..| ..|.|:.||.|||.||||||:||..|.|  :|||:    .:|:.:||||:.||
Mouse   575 RDDILAVLLEA-GADVTITNNNGFNALHHAALRGNPSAMR--VLLSKLPRPWIVDEKKDDGYTAL 636

  Fly   636 HLAALNGHAQVVETLVTEGQAELDIRNNRQQTPFLLAVSQGHAGVIERLVRLSCDVNAKDEDGDN 700
            ||||||.|.:|.|.||.:|.|.|||:|..|||...|||.:.|..::..|||....::.:|:|||.
Mouse   637 HLAALNNHVEVAELLVHQGNANLDIQNVNQQTALHLAVERQHTQIVRLLVRAGAKLDIQDKDGDT 701

  Fly   701 AMHLCVIKKSNLQSAAEPQPEEAPEIHKFYLSLVHSSIRPEDRLMYSILIYLSRAGCRVELNNAN 765
            .:|                                      :.|.:..|..|.:.....::...:
Mouse   702 PLH--------------------------------------EALRHHTLSQLRQLQDMQDVGKVD 728

  Fly   766 ASIFEWITDRHIRQLIFGQQGEAESLPRNLQALEVSAGSADGEESSASAGA---ESNGAGPGSVA 827
            |:   |...::...:..|.||                    .|:.||::.|   .:|||      
Mouse   729 AA---WEPSKNTLIMGLGTQG--------------------AEKKSAASIACFLAANGA------ 764

  Fly   828 APPPPQRQTFELMPKPNDIPAIGVGASPSTPSASPGVKKLNSDATPQNVSPQVAPRKKAPKPPVT 892
                    ...:..|.        |.||......|.:.|..:....:.||.||..|    .|.:.
Mouse   765 --------DLSIRNKK--------GQSPLDLCPDPSLCKALAKCHKEKVSGQVGSR----SPSMI 809

  Fly   893 TSSSSTALEAGAA---------GP----STSPVIVPGP----------------HECIVCNEILP 928
            ::.|.|..|....         ||    :|..:..|..                .||:||::...
Mouse   810 SNDSETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVKKCLICKEQVQSRTKIEECVVCSDKKA 874

  Fly   929 MVRFEPCQHQIACEECGIRMKKCLRCAVAIERR---LTVSGRVVALPTSTSSPSDPTRLPSGDL- 989
            .|.|:||.|..|||.|...||||::|...:|||   :|..|     ..|:..|||  .:.||:: 
Mouse   875 AVLFQPCGHMCACENCASLMKKCVQCRAVVERRVPFITCCG-----GKSSEDPSD--EISSGNIP 932

  Fly   990 --------------LRYLENKVLEFEESHFCGICMERKRDVAFLCGHGACSHCAETLRTCHMCRK 1040
                          ::.|:.::.:.:|...|.:|::|.:::.||||||.|..|.:.:..|.:|||
Mouse   933 VLQKDKDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFLCGHGTCQLCGDRMSECPICRK 997

  Fly  1041 TILKKINLY 1049
            .|.::|.||
Mouse   998 AIERRILLY 1006

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mib2NP_001260554.1 MIB_HERC2 8..73 CDD:284184 35/64 (55%)
ZZ_Mind_bomb 85..129 CDD:239079 20/43 (47%)
MIB_HERC2 156..220 CDD:284184 33/63 (52%)
ANK 464..582 CDD:238125 45/117 (38%)
ANK repeat 464..494 CDD:293786 10/29 (34%)
Ank_2 468..560 CDD:289560 32/91 (35%)
ANK repeat 496..527 CDD:293786 13/30 (43%)
ANK repeat 529..560 CDD:293786 7/30 (23%)
Ank_5 549..604 CDD:290568 25/54 (46%)
ANK 557..685 CDD:238125 65/131 (50%)
ANK repeat 596..628 CDD:293786 17/35 (49%)
Ank_2 601..695 CDD:289560 47/97 (48%)
ANK repeat 630..662 CDD:293786 20/31 (65%)
ANK repeat 664..695 CDD:293786 10/30 (33%)
zf-C3HC4_3 918..961 CDD:290631 19/42 (45%)
zf-C3HC4_3 1002..1044 CDD:290631 17/41 (41%)
Mib1NP_001351926.1 MIB_HERC2 15..71 CDD:369043 35/64 (55%)
ZZ_Mind_bomb 83..127 CDD:239079 20/43 (47%)
MIB_HERC2 154..218 CDD:369043 33/63 (52%)
SH3_15 246..311 CDD:375773 30/65 (46%)
SH3_15 333..397 CDD:375773 30/65 (46%)
ANK 1 430..460 8/29 (28%)
PHA03095 439..>710 CDD:222980 113/311 (36%)
ANK 2 463..492 9/28 (32%)
ANK repeat 464..494 CDD:293786 10/29 (34%)
ANK repeat 496..560 CDD:293786 21/63 (33%)
ANK 3 496..525 12/28 (43%)
ANK 4 529..558 7/28 (25%)
ANK repeat 562..593 CDD:293786 13/31 (42%)
ANK 5 562..591 12/29 (41%)
ANK 6 595..627 17/33 (52%)
ANK repeat 631..663 CDD:293786 20/31 (65%)
ANK 7 631..661 18/29 (62%)
ANK repeat 665..696 CDD:293786 10/30 (33%)
ANK 8 665..694 10/28 (36%)
Ank_2 670..770 CDD:372319 27/174 (16%)
ANK 9 698..729 7/68 (10%)
RING1-HC_MIB1 818..854 CDD:319638 5/35 (14%)
RING-HC finger (C3HC4-type) 819..853 CDD:319638 4/33 (12%)
RING2-HC_MIB1 865..901 CDD:319639 17/35 (49%)
RING-HC finger (C3HC4-type) 866..900 CDD:319639 16/33 (48%)
RING3-HC_MIB1 962..1003 CDD:319641 16/40 (40%)
RING-HC finger (C3HC4-type) 963..995 CDD:319641 12/31 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4582
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D119594at33208
OrthoFinder 1 1.000 - - FOG0002693
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_104088
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X100
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.720

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