DRSC/TRiP Functional Genomics Resources

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Protein Alignment mib2 and gldi-4

DIOPT Version :10

Sequence 1:NP_609933.1 Gene:mib2 / 35170 FlyBaseID:FBgn0086442 Length:1049 Species:Drosophila melanogaster
Sequence 2:NP_501086.1 Gene:gldi-4 / 177467 WormBaseID:WBGene00015552 Length:498 Species:Caenorhabditis elegans


Alignment Length:278 Identity:58/278 - (20%)
Similarity:96/278 - (34%) Gaps:103/278 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 CDGCSKAGIAGIVFKCAQCPNYHLCAYCYAEDLHDIEHPFIRYTTPNSLGVRLPMRKGAKRIQLR 151
            ||.|... |.|..||||.|.||.||..|.|..:| .:|..||..:.|:|                
 Worm   196 CDKCQDL-IIGHRFKCAICYNYDLCETCEAAGVH-AQHALIRLVSENTL---------------- 242

  Fly   152 GIFVGSKVVRGPDWEWNEQDGGEGRTGRVMEIRGWDNESCRSVANVAWVTGSTNVYRLG------ 210
              |....:|:.|: |..:|:|         :::...:...|::        ...:.|||      
 Worm   243 --FPEHLIVKNPE-EVKDQNG---------QVQAIASSRDRAI--------QVPLRRLGITPQAI 287

  Fly   211 -HKGNVDLKYITATCGGH-----YYKDHM------------PVLGQTEELQPVAPMVKPSFS--- 254
             .|.||. :|:.|....:     :|..||            |.|..|.:.:.|.   |.||.   
 Worm   288 ATKNNVS-RYLNAQSDRNIIEDPWYAQHMSSRKPQTYERMHPKLKDTTDGKKVQ---KVSFRDRF 348

  Fly   255 --------------------------VGDRVKVCLEVDALMKLQQGHGGWNPRMVEHLSKLGTVH 293
                                      :.::.|..:|.:.|||.::        .:|.:.|..|::
 Worm   349 YKKAESSLDKHEKQLRFDLSASRQEFIREKEKFRVEKETLMKQKE--------QIEEMMKQETIN 405

  Fly   294 RITDKGDIRVQYENCPNR 311
            ..|::.....::|...|:
 Worm   406 FETNRAFFSDRFEPIFNK 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mib2NP_609933.1 MIB_HERC2 8..74 CDD:461991
ZZ_Mind_bomb 85..129 CDD:239079 19/41 (46%)
MIB_HERC2 156..220 CDD:461991 12/70 (17%)
SH3_15 253..319 CDD:465720 12/88 (14%)
SH3_15 325..391 CDD:465720
ANKYR 398..664 CDD:440430
ANK repeat 464..494 CDD:293786
ANK repeat 496..527 CDD:293786
ANK repeat 529..560 CDD:293786
ANK repeat 596..628 CDD:293786
ANK repeat 630..662 CDD:293786
Ank_5 650..705 CDD:433530
ANK repeat 664..695 CDD:293786
PRK14959 <791..>919 CDD:184923
RING-HC_MIB2_rpt1 918..955 CDD:438386
RING-HC_MIBs-like 1004..1042 CDD:438183
gldi-4NP_501086.1 ZZ_NBR1_like 194..236 CDD:239080 19/41 (46%)
Blue background indicates that the domain is not in the aligned region.

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