DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mib2 and mib2

DIOPT Version :9

Sequence 1:NP_001260554.1 Gene:mib2 / 35170 FlyBaseID:FBgn0086442 Length:1049 Species:Drosophila melanogaster
Sequence 2:NP_001116916.1 Gene:mib2 / 100144683 XenbaseID:XB-GENE-1217510 Length:951 Species:Xenopus tropicalis


Alignment Length:1071 Identity:448/1071 - (41%)
Similarity:615/1071 - (57%) Gaps:151/1071 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ASIPPGIRVVRGPNWIWSNQDDGEGHVGTVCEIGRCGSTHSPENTVVVNWDSGHRTNYRVGYQNQ 67
            |::..|:|||||.:|.|||||:|||.:|||.||||.||..:|:.||||.||.|.|||||.|:|..
 Frog     7 AAMQVGMRVVRGIDWKWSNQDNGEGSMGTVVEIGRQGSPTTPDKTVVVQWDHGTRTNYRTGFQGA 71

  Fly    68 YDLIIVDNAQVGVRHSNVVCDGCSKAGIAGIVFKCAQCPNYHLCAYCYAEDLHDIEHPFIRYTTP 132
            |||::.||||.||||.|::||.|.|.||.|:.:||..|.:|.||..||..:.||:.|.|.||.|.
 Frog    72 YDLLLYDNAQTGVRHPNIICDCCKKHGIRGMRWKCKVCFDYDLCTQCYMNNKHDLSHIFERYETA 136

  Fly   133 NSLGVRLPMRKGAKRIQLRGIFVGSKVVRGPDWEWNEQDGGEGRTGRVMEIRGWDNESCRSVANV 197
            :|..|.|..|:|..|:.|:|||.|:||||||||||..||||||:.|||::|||||.|:.||||:|
 Frog   137 DSRPVILSTRQGLPRVVLKGIFQGAKVVRGPDWEWGNQDGGEGKVGRVVDIRGWDVETGRSVASV 201

  Fly   198 AWVTGSTNVYRLGHKGNVDLKYITATCGGHYYKDHMPVLGQTEELQPVAPMVKPSFSVGDRVKVC 262
            .|..|:|||||:||||.||||.||...|||||:||:|.||:..|||......:..|..||:||..
 Frog   202 TWADGTTNVYRVGHKGKVDLKCITDAPGGHYYRDHLPKLGKPAELQRKESSERHPFQHGDKVKCL 266

  Fly   263 LEVDALMKLQQGHGGWNPRMVEHLSKLGTVHRITDKGDIRVQYENCPNRWTFHPAALVKVVSFRV 327
            |:|:.|.::|:|||||||:|.|.:.:.|||||||::||:|||| |...||||||.||.|..||.|
 Frog   267 LDVEILREMQEGHGGWNPKMAEFIGQTGTVHRITERGDVRVQY-NSETRWTFHPGALTKQNSFWV 330

  Fly   328 GDLVTIINDANKVQQLQKGHGEWIEIMRHALGKICKVVKVYSDGDLRIQQLDDGFEWTLNPKCV- 391
            ||:|.::::.:.|::||.|||||.:.|..|||:|.||:||:.|||:|:..  .|..||.||.|: 
 Frog   331 GDVVRVMDNMDAVKKLQVGHGEWTDDMVSALGQIGKVIKVFGDGDMRVSV--GGQSWTFNPACLT 393

  Fly   392 ---KLERSPLAT---AAERSNSMMDLSHRRADHVMTPLSGLSGSSVADKLVREAAQGHLDFVRQY 450
               :.|.:.|.|   |.|..|:::.:..:.       ||..:.......||.|||||:...||:.
 Frog   394 SYQREEDANLMTTENAKESKNTLVSILEKL-------LSQKTDCESPTSLVIEAAQGNTAKVREM 451

  Fly   451 LDVNPSQVDVMSGGKACIQVASHQGYVDLVSYLISKGANVNAVDKEGDSALHYAAFGNQPATMRV 515
            |...|.:||:.:.|:..:|||||.||:::|..|:...||::..|.|||:||||||:|||...:||
 Frog   452 LQKYPDKVDIKNQGRTALQVASHLGYMEVVKVLLQANANIDLRDDEGDTALHYAAYGNQAGVVRV 516

  Fly   516 LLQHGAEVNFLNSSHCSALHICAHKKTPHCVRELLQHNANVNIQDSYGDTALHDAIGKENTEVVE 580
            ||..||....||::.|:||:|..:|.....|:.|...|..:|:|||:|||.||.||..:...::|
 Frog   517 LLSKGANAELLNNAKCTALYIAVNKGFTEVVQVLCNPNCAINMQDSFGDTPLHYAITADFRSIIE 581

  Fly   581 LLCNAPNLDFTVKNNRGFNVLHHAALKGNVVAARRILLLSRQLVNVRKDDGFAALHLAALNGHAQ 645
            :|...||:||||:||:|||:|||:||||||:|..:||..:||||:.:|:|||.|||||.||.|.:
 Frog   582 ILTEVPNIDFTVQNNQGFNLLHHSALKGNVLAVSKILERARQLVDSKKEDGFTALHLATLNNHQE 646

  Fly   646 VVETLVTEGQAELDIRNNRQQTPFLLAVSQGHAGVIERLVRLSCDVNAKDEDGDNAMHLCVIKKS 710
            |||.|:.||:.::::||||.|||..|||:|||..::..||....||||:|||||..||:..::  
 Frog   647 VVEILIKEGRCDVNLRNNRNQTPLHLAVAQGHISLVHLLVTEGADVNAEDEDGDTPMHIVFVR-- 709

  Fly   711 NLQSAAEPQPEEAPEIHKFYLSLVHSSIRPEDRLMYSILIYLSRAGCRVELNNANASIFEWITDR 775
                                                                            :
 Frog   710 ----------------------------------------------------------------Q 710

  Fly   776 HIRQLIFGQQGEAESLPRNLQA------LEVSAGSADGEESSASAGAESNGAGPGSVAAPPPPQR 834
            |::.:...|:|...||...|:|      :|::.|||.. ...|.:||:.|.|...          
 Frog   711 HLKSIDSQQEGNGSSLLTKLEASGLPGNIELNVGSAMA-CFLALSGADINYANHR---------- 764

  Fly   835 QTFELMPKPNDIPAIGVGASPSTPSASPGVKKLNSDATPQNVSPQVAPRKKAPKPPV-------- 891
                             |.||....|...:..|     .:|.:.:...:.:...|.|        
 Frog   765 -----------------GKSPLDLIADGRITHL-----VKNFAQKFREQVELDSPTVSCSLRRVH 807

  Fly   892 TTSSSSTALEAGAAGPSTSPVIVPGPHECIVCNEILPMVRFEPCQHQIACEECGIRMKKCLRCAV 956
            ||.::.|.|         ||.....|.||:||:|:..:|.|.||||.|.||||..|||||::|.|
 Frog   808 TTPNTMTNL---------SPCSAASPAECLVCSELAVLVSFFPCQHSIVCEECSRRMKKCIKCQV 863

  Fly   957 AIERRLTVSGRVVALPTSTSSPSDPTRLPSGD---LLRYLENKVLEFEESHFCGICMERKRDVAF 1018
            .|.|:|......|     ..|||    |...|   ::..|:|:..:.||...|.||::....:.|
 Frog   864 CIARKLRQDSTEV-----ECSPS----LEVSDQKKVMEELQNRYRQMEERITCPICIDNHIKLVF 919

  Fly  1019 LCGHGACSHCAETLRTCHMCRKTILKKINLY 1049
            .||||:|:.|:.:|..|.:||:.|.::|.::
 Frog   920 QCGHGSCTECSTSLTACPICRQLIRERIQIF 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mib2NP_001260554.1 MIB_HERC2 8..73 CDD:284184 42/64 (66%)
ZZ_Mind_bomb 85..129 CDD:239079 19/43 (44%)
MIB_HERC2 156..220 CDD:284184 46/63 (73%)
ANK 464..582 CDD:238125 53/117 (45%)
ANK repeat 464..494 CDD:293786 12/29 (41%)
Ank_2 468..560 CDD:289560 41/91 (45%)
ANK repeat 496..527 CDD:293786 18/30 (60%)
ANK repeat 529..560 CDD:293786 9/30 (30%)
Ank_5 549..604 CDD:290568 28/54 (52%)
ANK 557..685 CDD:238125 71/127 (56%)
ANK repeat 596..628 CDD:293786 19/31 (61%)
Ank_2 601..695 CDD:289560 53/93 (57%)
ANK repeat 630..662 CDD:293786 17/31 (55%)
ANK repeat 664..695 CDD:293786 16/30 (53%)
zf-C3HC4_3 918..961 CDD:290631 24/42 (57%)
zf-C3HC4_3 1002..1044 CDD:290631 16/41 (39%)
mib2NP_001116916.1 MIB_HERC2 12..77 CDD:369043 42/64 (66%)
ZZ_Mind_bomb 89..133 CDD:239079 19/43 (44%)
MIB_HERC2 160..224 CDD:369043 46/63 (73%)
SH3_15 257..322 CDD:375773 38/64 (59%)
SH3_15 328..392 CDD:375773 30/63 (48%)
ANK repeat 434..463 CDD:293786 11/28 (39%)
PHA03095 448..>711 CDD:222980 131/262 (50%)
ANK repeat 465..495 CDD:293786 12/29 (41%)
ANK repeat 497..528 CDD:293786 19/30 (63%)
ANK repeat 530..561 CDD:293786 10/30 (33%)
ANK repeat 598..629 CDD:293786 20/30 (67%)
PHA03095 625..>813 CDD:222980 59/193 (31%)
ANK repeat 631..663 CDD:293786 18/31 (58%)
ANK repeat 665..696 CDD:293786 16/30 (53%)
RING1-HC_MIB2 826..862 CDD:319640 3/35 (9%)
RING-HC finger (C3HC4-type) 827..861 CDD:319640 3/33 (9%)
RING2-HC_MIB2 906..951 CDD:319642 19/44 (43%)
RING-HC finger (C3HC4-type) 907..939 CDD:319642 10/31 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 109 1.000 Domainoid score I6296
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H16062
Inparanoid 1 1.050 770 1.000 Inparanoid score I533
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D119594at33208
OrthoFinder 1 1.000 - - FOG0002693
OrthoInspector 1 1.000 - - oto104765
Panther 1 1.100 - - LDO PTHR24202
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R13065
SonicParanoid 1 1.000 - - X100
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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