DRSC/TRiP Functional Genomics Resources

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Protein Alignment hook and Ccdc88c

DIOPT Version :10

Sequence 1:NP_476573.1 Gene:hook / 35169 FlyBaseID:FBgn0001202 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_080957.2 Gene:Ccdc88c / 68339 MGIID:1915589 Length:2009 Species:Mus musculus


Alignment Length:891 Identity:193/891 - (21%)
Similarity:339/891 - (38%) Gaps:284/891 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLEWFKTL-NLNAPHAD----AESLADGVALAQALNQFAPESFTDAWLSKIKASAVGSNWRLRMS 71
            |:.|.||. :..:.|.|    ...|.||:.|.|.:.|..|.. ::..::|    .|.::..||:.
Mouse    17 LVTWVKTFGSFGSGHQDNLTLYMDLVDGIFLNQIMLQIDPRP-SNQRINK----HVNNDVNLRIQ 76

  Fly    72 NLKKVTQSVYDYYSDVLNYSLSDFSKPDLQRIAEK----CDLGELERLLQLVLGCAVNCAEKQSY 132
            ||..:.:::..||.:||. .|...:.|::..|.:.    ..:.|::::|.|||||||.|..|:.:
Mouse    77 NLSILVRNIKTYYQEVLQ-QLIVMNLPNVLMIGKDPLSGKSMEEIKKVLLLVLGCAVQCERKEEF 140

  Fly   133 ITEIMCLEEELQANIMRALQ-----------------------ELEA------------------ 156
            |..|..|:.|.||.|:..:|                       ||||                  
Mouse   141 IERIKQLDIETQAGIVAHIQEVTHNQENVFDLQWLDLPDVAPEELEALSRNMVFHLRRLIDERDE 205

  Fly   157 ----------------TRQASTPEGGVASSLSRGSRTGLLDSKAVQEDRDALAQKCFETEKKMLL 205
                            |:|..:| |..:|..|..|.|..|.|    ||:..||.:..:|:.::..
Mouse   206 CTELIVDLTQERDYLQTQQPPSP-GKFSSPDSTPSPTSSLSS----EDKQHLAVELADTKARLRR 265

  Fly   206 L---IDEKT-NLQQELHKLQQEFARLEQHSTVIGDDGVSLGPVQTGSVRYNELRRQLDLLKEELL 266
            :   ::||| .|....|::.|....|::..    .|.:.|......:..|   |.:||.|:|:..
Mouse   266 VRQELEEKTEQLADTRHEVDQLVLELQKAK----QDNIQLAADARSARAY---RDELDSLREKAN 323

  Fly   267 QSEGAREDL-KIKAQQQDTDLLHMQMRIEELMKSSAEV----TTLKDEVDVLRESNDKLKICEAQ 326
            :.|....|| :.|.:..|.|.  .:.|:|||.:.:..:    ..|::::...|..:||:...|.:
Mouse   324 RVERLEMDLVRCKEKLHDVDF--YKARMEELREDNIILIETKAMLEEQLTASRARSDKVHELEKE 386

  Fly   327 LDTYKKKLEDYN-----DLKKQVKILEERSADYVQQNAQFEEDAKRYANTKGQVELFKK--EIQD 384
            ....|.||.|..     |.|:..|:|||    |:......::..|..|:...::|...|  ::.|
Mouse   387 NLQLKSKLHDLELDRDADKKQIEKLLEE----YMVLEMAQKQSMKESAHLGWELEQLSKNADLSD 447

  Fly   385 LHAKL------DAESSKNVKLEFDNKNLESKNLALQRAKD-SLLKERDNLREAVDELKCGQLSSN 442
            ...|.      :..||:.:|||.:|::|:|   .:|..:| ||..|..:|:....|.:..|||..
Mouse   448 ASRKSFVFELNECASSRILKLEKENQSLQS---TIQGLRDTSLALEESSLKYGELEKENQQLSKK 509

  Fly   443 TALTGTTVSRELQPSATVEKLQR------------------------------------------ 465
            .....|.:.||.|.:..:|.|..                                          
Mouse   510 IEKLQTQLEREKQSNQDLETLSEELIREKEQLQSGMEALKADRARQIKDLEQEKGHLHQAVWSLR 574

  Fly   466 ----------LEAENKALREG--QGGQTALAQL----------LDDANK-------------RCE 495
                      :|.||:||.:.  :.| :.|:||          |::|.:             |.|
Mouse   575 ERPQVNSTKDVEKENRALHQAVTEAG-SKLSQLELEKQQLHRDLEEAKEKGEQAEALEKELHRLE 638

  Fly   496 NLREQ-------LKTANERILSLSHASQS---DDPILKES------------------------- 525
            ...||       ||.|.|::.:|.|.||.   ::..|::|                         
Mouse   639 KENEQLTKEVTSLKAATEKVEALEHQSQGLELENRSLRKSLDTLQNVSVQLEGLERDKQQLGQEN 703

  Fly   526 -EFGKQIKQL----------------------------------------MELNEQ----KTLQL 545
             |..|.::.:                                        :||:.|    :.|||
Mouse   704 LELRKMVEAMRFTSAKMAQIETENRQLEREKEELRRDVELLKTLSKKSERLELSYQSVSAENLQL 768

  Fly   546 EEAVTQST----SLQCKVTQLETNLSAREQEILVYDAKYRKCVEKAKEVIKSIDPRIAS-ALDAS 605
            :.::..||    :||.:::|||....|..:::......::: :|.|:|..|:::..:|. ..|..
Mouse   769 QHSLESSTHKSQALQRELSQLEAERQALRRDLETLQLTHKQ-LEGAEEDRKALEQEVAQLEKDKK 832

  Fly   606 VLEKSADLVEEEPKPKMSVMEEQLMTSAFYRLGVNAQRDAIDSKLA 651
            :|||.|..:.::.:.|.:::::    ||........:..|:|.:||
Mouse   833 LLEKEARRLWQQVELKDAILDD----SAAKLSAAEKESRALDKELA 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hookNP_476573.1 HOOK_N 7..158 CDD:465958 49/211 (23%)
HOOK 181..674 CDD:461694 135/656 (21%)
Ccdc88cNP_080957.2 HkD_Daple 12..164 CDD:411799 45/152 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..251 12/34 (35%)
SMC_prok_B <267..627 CDD:274008 82/376 (22%)
SMC_prok_B 489..1307 CDD:274008 70/392 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1002..1036
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1410..1716
PHA03307 1625..>2001 CDD:223039
GBA. /evidence=ECO:0000250|UniProtKB:Q9P219 1652..1683
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1757..1787
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1808..2009
PDZ-binding. /evidence=ECO:0000255 2006..2009
DVL1-binding. /evidence=ECO:0000269|PubMed:14750955 2007..2009
Blue background indicates that the domain is not in the aligned region.

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