DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hook and Hook1

DIOPT Version :9

Sequence 1:NP_476573.1 Gene:hook / 35169 FlyBaseID:FBgn0001202 Length:679 Species:Drosophila melanogaster
Sequence 2:XP_038965825.1 Gene:Hook1 / 313370 RGDID:1309987 Length:733 Species:Rattus norvegicus


Alignment Length:721 Identity:231/721 - (32%)
Similarity:380/721 - (52%) Gaps:80/721 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLEWFKTLNLNAPHADAESLADGVALAQALNQFAPESFTDAWLSKIKASAVGSNWRLRMSNLKKV 76
            ||:.|||.   :|..|.:.|.:||.:||.|:|.....|:::|||:|| ..||.|||::.||||||
  Rat    26 LLQTFKTA---SPCQDVKQLTNGVTMAQVLHQIDVAWFSESWLSRIK-DDVGDNWRIKASNLKKV 86

  Fly    77 TQSVYDYYSDVLNYSLSDFSKPDLQRIAEKCDLGELERLLQLVLGCAVNCAEKQSYITEIMCLEE 141
            ...:..||.:.|...:|:...|||.:|.|..|..||.|||||:|||||||.:||.:|..||.|||
  Rat    87 LHGITSYYHEFLGQQISEELIPDLNQITESSDPVELGRLLQLILGCAVNCEKKQEHIKNIMTLEE 151

  Fly   142 ELQANIMRALQELEATRQASTPEGGVASSLSRGSRTGLLDSKAVQEDRDALAQKCFETEKKMLLL 206
            .:|..:|.|:|||.:....|:|.......|.:..:..|.:.:....:::.|.|:|.|.:.::..|
  Rat   152 SVQHVVMTAIQELMSKEIVSSPASDAVGELEQQLKRALEELQEALAEKEELKQRCQELDMQVTAL 216

  Fly   207 IDEKTNLQQELHKLQQEFARLEQHSTVIGDDGVSLGPVQTGSVRYNELRRQLDLLKEELLQSEGA 271
            .|||.:|..|...:.::..:|         ||....|....:.:|..::.||:.|:||..:.|.|
  Rat   217 QDEKNSLVSENEMMNEKLDQL---------DGSFDDPNTMVAKKYFHVQLQLEQLQEENYRLEAA 272

  Fly   272 REDLKIKAQQQDTDLLHMQMRIEELMKSSAEVTTLKDEVDVLRESNDKLKICEAQLDTYKKKLED 336
            ::|.::..::.:..|:..|.|.:||...:.|...||||:||||.::||....|:.::.|::||:|
  Rat   273 KDDYRVHCEELEKQLIEFQHRNDELTSLAEETRALKDEIDVLRATSDKANKLESTVEVYRQKLQD 337

  Fly   337 YNDLKKQVKILEERSADYVQQNAQFEEDAKRYANTKGQVELFKKEIQDLHAKLDAESSKNVKLEF 401
            .|||:||||.|:|.:..|:......||:.|:....:.|:|.:|:::||||.||.:||.:...|.|
  Rat   338 LNDLRKQVKSLQETNMMYMHNTVSLEEELKKANAARAQLETYKRQVQDLHTKLSSESKRADTLAF 402

  Fly   402 DNKNLESKNLALQRAKDSLLKERDNLREAVDELKC--------GQLSSNTALTGTTVSRELQPSA 458
            :.|.||.|:..|.:.|:.|:::||.|:|..:||:|        .|..|:...:...::.|:.|..
  Rat   403 EMKRLEEKHETLLKEKERLIEQRDTLKETNEELRCSKAQQDHLNQADSSATKSYENLAAEIMPVE 467

  Fly   459 TVEKLQRLEAENKALREGQGGQTALAQLLDDANKRCENLREQL--------------KTANERIL 509
            ..|...||:.|||.||..|.|         ..|:|.|.|:|||              :.:.|||.
  Rat   468 YREVFIRLQHENKMLRLQQEG---------TENERIEQLQEQLEQKHRKMNELETEQRLSKERIG 523

  Fly   510 SLS------HASQSDDPILKESEFGKQIKQLMELNEQKTLQLEEAVTQSTSL-----------QC 557
            .|.      ..|..:.....|.|...::||.:|.:.:|..::.|.:.:...|           ..
  Rat   524 ELQQQIEDLQKSLQEQGSKSEGESSSKLKQKLEAHMEKLTEVHEELQKKQELIEDLQPDISQNAQ 588

  Fly   558 KVTQLETNLSAREQEILVYDAKYRKCVEKAKEVIKSIDPRI--ASA----LDASVLEKS--ADLV 614
            |:::||..|..:::::...:.:|:..:|||:.|||::||::  |||    |...:.||.  .:::
  Rat   589 KISELEAALQKKDEDMKAMEERYKMYLEKARNVIKTLDPKLNPASAEIMLLRKQLAEKDRRIEIL 653

  Fly   615 EEEPK-PKMSVMEEQLMTSAFYRLGVNAQRDAIDSKL---------AILMGSGQTFLARQRQ-SA 668
            |.|.| .|....||:|:.||:|...:..|:..::|:|         ::.....::|||:||. ::
  Rat   654 ESECKVAKFRDYEEKLIVSAWYNKSLAFQKLGMESRLVSGASACKDSVAAAPARSFLAQQRHITS 718

  Fly   669 PRKSLS 674
            .|::||
  Rat   719 TRRNLS 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hookNP_476573.1 HOOK 8..675 CDD:283312 231/721 (32%)
Hook1XP_038965825.1 HkD_Hook1 27..168 CDD:411796 68/144 (47%)
HOOK 191..724 CDD:398962 156/550 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 352 1.000 Domainoid score I976
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 353 1.000 Inparanoid score I2182
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D373785at33208
OrthoFinder 1 1.000 - - FOG0001903
OrthoInspector 1 1.000 - - otm45988
orthoMCL 1 0.900 - - OOG6_101918
Panther 1 1.100 - - LDO PTHR18947
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2196
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.930

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