DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sidpn and E(spl)mbeta-HLH

DIOPT Version :10

Sequence 1:NP_523599.1 Gene:Sidpn / 35168 FlyBaseID:FBgn0032741 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_524505.2 Gene:E(spl)mbeta-HLH / 43152 FlyBaseID:FBgn0002733 Length:195 Species:Drosophila melanogaster


Alignment Length:261 Identity:72/261 - (27%)
Similarity:101/261 - (38%) Gaps:115/261 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 KRTNKPLMEKRRRARINQSLAILKALILESTKTQNAKNGEGQAKH-TKLEKADILELTVRHFQRH 114
            ::..||::|::||||||:.|..||.:::|.. ||     ||:  | |:|||||||||||.|.::.
  Fly    14 RKVMKPMLERKRRARINKCLDELKDIMVECL-TQ-----EGE--HITRLEKADILELTVEHMKKL 70

  Fly   115 RNLD---------------DPTVN---KYRAGYTDCAREVARYLATPEPPPMGTMPTLAEPGSK- 160
            |...               ||.::   .:||||...|.||::.||             |.||.. 
  Fly    71 RAQKQLRLSSVTGGVSPSADPKLSIAESFRAGYVHAANEVSKTLA-------------AVPGVSV 122

  Fly   161 ---ARLLRHLDQCIAEIDVEICPHSTAAFAESPSSSSCFDLNHGKKSQPEEHSLDYSSQDSNPVD 222
               .:|:.||.                                        |.|:|         
  Fly   123 DLGTQLMSHLG----------------------------------------HRLNY--------- 138

  Fly   223 YSKGLKMVAAEQRTLPV---TPAPQDENNNRGLQAQAQTPIPIQVQSQTQGQTSPHVDAVAPSEL 284
                |::|..   :||:   ..||.::      ||.. ||.|.:..|...|..||     ||||.
  Fly   139 ----LQVVVP---SLPIGVPLQAPVED------QAMV-TPPPSECDSLESGACSP-----APSEA 184

  Fly   285 S 285
            |
  Fly   185 S 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SidpnNP_523599.1 bHLH_O_HES 58..116 CDD:381416 29/58 (50%)
Hairy_orange 124..172 CDD:462193 15/51 (29%)
E(spl)mbeta-HLHNP_524505.2 bHLH-O_ESMB_like 7..75 CDD:381584 32/68 (47%)
ORANGE 97..141 CDD:128787 19/109 (17%)

Return to query results.
Submit another query.