DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sidpn and her15.2

DIOPT Version :9

Sequence 1:NP_523599.1 Gene:Sidpn / 35168 FlyBaseID:FBgn0032741 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_001099062.1 Gene:her15.2 / 359836 ZFINID:ZDB-GENE-070627-1 Length:149 Species:Danio rerio


Alignment Length:170 Identity:44/170 - (25%)
Similarity:70/170 - (41%) Gaps:51/170 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 DISKRTN-------KPLMEKRRRARINQSLAILKALILESTKTQNAKNGEGQAKHTKLEKADILE 105
            :.||.:|       ||::||.||.|||..:..||:::        .|..:.|..:.|||||||||
Zfish     8 EYSKLSNKEKHKLRKPVVEKMRRDRINNCIEQLKSML--------EKEFQQQDPNAKLEKADILE 64

  Fly   106 LTVRHFQRHRNLDDPTVNKYRAGYTDCAREVARYLATPEPPPMGTMPTLAEPGSKARLLRHLDQC 170
            :||...::......|. |....||:.|.||...:|:.               ||:| :.:.|.| 
Zfish    65 MTVVFLKQQLRPKTPQ-NAQIEGYSQCWRETISFLSV---------------GSEA-VAQRLQQ- 111

  Fly   171 IAEIDVEICPHSTAAFAESPSSSSCFDLNHGKKSQPEEHS 210
                              ....|:..:|.|..::..::|:
Zfish   112 ------------------EARRSAAPELTHTSEAPHQQHT 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SidpnNP_523599.1 HLH 48..117 CDD:238036 27/75 (36%)
Hairy_orange 125..172 CDD:284859 11/46 (24%)
her15.2NP_001099062.1 HLH 19..72 CDD:278439 24/60 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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