DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sidpn and dpn

DIOPT Version :9

Sequence 1:NP_523599.1 Gene:Sidpn / 35168 FlyBaseID:FBgn0032741 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_476923.1 Gene:dpn / 35800 FlyBaseID:FBgn0010109 Length:435 Species:Drosophila melanogaster


Alignment Length:530 Identity:130/530 - (24%)
Similarity:200/530 - (37%) Gaps:153/530 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 GFTAAGSTNGSGIKSIGLVSSTQNVTSSQDISKRTNKPLMEKRRRARINQSLAILKALILESTKT 83
            |::.:..:||.        .|..|..|..:: ::||||:||||||||||..|..||:||||:.| 
  Fly    18 GYSDSYGSNGR--------MSNPNGLSKAEL-RKTNKPIMEKRRRARINHCLNELKSLILEAMK- 72

  Fly    84 QNAKNGEGQAKHTKLEKADILELTVRHFQ----RHRNL---DDPT-VNKYRAGYTDCAREVARYL 140
                  :..|:|||||||||||:||:|.|    :..|:   .||: |.|::.|:.:||.||.||:
  Fly    73 ------KDPARHTKLEKADILEMTVKHLQSVQRQQLNMAIQSDPSVVQKFKTGFVECAEEVNRYV 131

  Fly   141 ATPEPPPMGTMPTLAEPGSKARLLRHLDQCIAEIDVEICPHSTAAFAESPSSSSCFDLNHGKKSQ 205
            :..:.         .:.|.:.||..||:||                                   
  Fly   132 SQMDG---------IDTGVRQRLSAHLNQC----------------------------------- 152

  Fly   206 PEEHSLDYSSQDSNPVDYSKGLK-----MVAAEQRTLPVTPA-PQDENNNRGLQAQAQT------ 258
              .:||:.....||   :|.|.:     ..|......|:.|: |||.|||...::.|..      
  Fly   153 --ANSLEQIGSMSN---FSNGYRGGLFPATAVTAAPTPLFPSLPQDLNNNSRTESSAPAIQMGGL 212

  Fly   259 -PIPIQVQSQTQGQTSPHVDAVA--PSELSYEEDRNKVCANV-------------LEQYKQQLKA 307
             .||.::.|.......|:..:.|  |...::......|.|..             |..|.|..:.
  Fly   213 QLIPSRLPSGEFALIMPNTGSAAPPPGPFAWPGSAAGVAAGTASAALASIANPTHLNDYTQSFRM 277

  Fly   308 HVQQQPESANGVLVLPPHYV-----QLAAALGLSAQPLVDPIATRTDFERLIELQRVQPHLAGKL 367
            ....:|.:.:....||.:.:     |....:..|..|.:.||::.:  ....|.:...|.:....
  Fly   278 SAFSKPVNTSVPANLPENLIHTLPGQTQLPVKNSTSPPLSPISSIS--SHCEESRAASPTVDVMS 340

  Fly   368 SPSFPGGLEAAHVAAAAAAYANSMAVAASAGASVAAMATSGAGTPTVHQERPASVAASVSSGVSM 432
            ..||.|........:|..::..|.::..|||:.    .:||...|..|                 
  Fly   341 KHSFAGVFSTPPPTSAETSFNTSGSLNLSAGSH----DSSGCSRPLAH----------------- 384

  Fly   433 SELKSMPATQQSSPRSESGIGSNENEAPATSPRPQTSNAARQALRQRQEEEYHYMAQAAAAAAAA 497
                    .||....|.|||...:.||.|.|        :..:|.:...:::        .|.|.
  Fly   385 --------LQQQQVSSTSGIAKRDREAEAES--------SDCSLDEPSSKKF--------LAGAI 425

  Fly   498 GQDESMWRPW 507
            .:..|.||||
  Fly   426 EKSSSAWRPW 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SidpnNP_523599.1 HLH 48..117 CDD:238036 38/72 (53%)
Hairy_orange 125..172 CDD:284859 14/46 (30%)
dpnNP_476923.1 HLH 39..101 CDD:238036 38/69 (55%)
ORANGE 114..158 CDD:128787 17/89 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445400
Domainoid 1 1.000 65 1.000 Domainoid score I6616
eggNOG 1 0.900 - - E1_KOG4304
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D105111at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10985
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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