DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sidpn and her5

DIOPT Version :9

Sequence 1:NP_523599.1 Gene:Sidpn / 35168 FlyBaseID:FBgn0032741 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_571152.1 Gene:her5 / 30285 ZFINID:ZDB-GENE-990415-90 Length:205 Species:Danio rerio


Alignment Length:227 Identity:60/227 - (26%)
Similarity:87/227 - (38%) Gaps:74/227 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 KRTNKPLMEKRRRARINQSLAILKALILESTKTQNAKNGEGQAKHTKLEKADILELTVRHFQR-- 113
            :|..|||||||||.||||||..|:.|:||:|..:..||       .|:|||:||| :|.||.|  
Zfish     7 RRVPKPLMEKRRRDRINQSLETLRMLLLENTNNEKLKN-------PKVEKAEILE-SVVHFLRAE 63

  Fly   114 ---------------------HRNLDDPTVNK-YRAGYTDCAREVARYLATPEPPPMGTMPTLAE 156
                                 ..:::.|...: |..|...|...|:.::.               
Zfish    64 QASE
TDPFQITRVKRARTEESDEDVESPCKRQSYHDGMRTCLLRVSNFIT--------------- 113

  Fly   157 PGSKARLLRHLDQCIAEIDVEICPHS-TAAFAESPSSSSCFDLNHGKKSQPEEHSLDYSSQD--- 217
             |......:.|::....|...   || ......:||           ..:|:.|..:..||.   
Zfish   114 -GKSHEFGQELEKACENIHKS---HSRQVQLLSTPS-----------LIEPQVHLYEDPSQQHLA 163

  Fly   218 ----SNPVDYSKGLKMVAAEQRTLP-VTPAPQ 244
                ||....|...|:.   |||:| :|.:|:
Zfish   164 HVQLSNSCTPSGCSKLA---QRTVPAMTSSPK 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SidpnNP_523599.1 HLH 48..117 CDD:238036 34/88 (39%)
Hairy_orange 125..172 CDD:284859 6/46 (13%)
her5NP_571152.1 HLH 4..67 CDD:238036 34/67 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4304
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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